RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SMIM22K7EJ46 135 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 GNL2Q13823 731 aaKnown RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ZRSR1Q15695 479 aaKnown RBP8.68□□□□□ -1.02
C11orf54-207ENST00000528288 MYSM1Q5VVJ2 828 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 FBXO18Q8NFZ0 1043 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ATG3Q9NT62 314 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 ANO10Q9NW15 660 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 CTNNA3Q9UI47 895 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
C11orf54-207ENST00000528288 PRKAB2O43741 272 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 ALG1Q9BT22 464 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 IFNKQ9P0W0 207 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 RFX7Q2KHR2 1363 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 NLRP10Q86W26 655 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 CEP57L1Q8IYX8 460 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 PDCL2Q8N4E4 241 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 ZBTB38Q8NAP3 1195 aaPredicted RBP8.67□□□□□ -1.02
C11orf54-207ENST00000528288 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 RIPOR2Q9Y4F9 1068 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 WTIPA6NIX2 430 aaPredicted RBP8.67□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF202O95125 648 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 TRDNQ13061 729 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 ARMT1Q9H993 441 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 RTEL1Q9NZ71 1219 aa8.67□□□□□ -1.02
C11orf54-207ENST00000528288 ZNF142P52746 1687 aaPredicted RBP8.67□□□□□ -1.02
C11orf54-207ENST00000528288 NEDD4P46934 1319 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 PCCAP05165 728 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 ATP1A3P13637 1013 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 PFKFB1P16118 471 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 METAP2P50579 478 aaKnown RBP eCLIP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 ADALQ6DHV7 355 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 MIGA1Q8NAN2 632 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 XPO4Q9C0E2 1151 aaKnown RBP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 BTG4Q9NY30 223 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 GLI3P10071 1580 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 KIF23Q02241 960 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 CCDC94Q9BW85 323 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 ANKRD18BA2A2Z9 1011 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 FOXN1O15353 648 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 SLC3A2P08195 630 aaKnown RBP8.66□□□□□ -1.02
C11orf54-207ENST00000528288 ADD2P35612 726 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 PNOCQ13519 176 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 MAGEB6Q8N7X4 407 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
C11orf54-207ENST00000528288 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 CTAGE5O15320 804 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 STARD3NLO95772 234 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 PDE6AP16499 860 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 ADRA2BP18089 450 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 GUCY1A2P33402 732 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
C11orf54-207ENST00000528288 CTSWP56202 376 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 CEP135Q66GS9 1140 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 KRT40Q6A162 431 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 NBPF11Q86T75 865 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 CARD10Q9BWT7 1032 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 STRCP1A6NGW2 1772 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 CSF1RP07333 972 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 NCBP1Q09161 790 aaKnown RBP8.65□□□□□ -1.02
C11orf54-207ENST00000528288 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
C11orf54-207ENST00000528288 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 KIF1AQ12756 1690 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 MAP3K15Q6ZN16 1313 aa8.65□□□□□ -1.02
C11orf54-207ENST00000528288 MBD4O95243 580 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.03
C11orf54-207ENST00000528288 CCDC112Q8NEF3 446 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.65□□□□□ -1.03
C11orf54-207ENST00000528288 TMX1Q9H3N1 280 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 ZHX1Q9UKY1 873 aaPredicted RBP8.65□□□□□ -1.03
C11orf54-207ENST00000528288 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.03
C11orf54-207ENST00000528288 TJP1Q07157 1748 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.03
C11orf54-207ENST00000528288 RANBP6O60518 1105 aaKnown RBP8.64□□□□□ -1.03
C11orf54-207ENST00000528288 ZFYP08048 801 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-207ENST00000528288 KCNA4P22459 653 aa8.64□□□□□ -1.03
C11orf54-207ENST00000528288 CCZ1BP86790 482 aa8.64□□□□□ -1.03
C11orf54-207ENST00000528288 CCZ1P86791 482 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-207ENST00000528288 TMEM67Q5HYA8 995 aa8.64□□□□□ -1.03
C11orf54-207ENST00000528288 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
C11orf54-207ENST00000528288 DPF2Q92785 391 aa8.64□□□□□ -1.03
C11orf54-207ENST00000528288 ANGEL1Q9UNK9 670 aaKnown RBP8.64□□□□□ -1.03
C11orf54-207ENST00000528288 RIC1Q4ADV7 1423 aa8.64□□□□□ -1.03
C11orf54-207ENST00000528288 GOLGA8AA7E2F4 631 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms