RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
SKP1-208ENST00000521216 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
SKP1-208ENST00000521216 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
SKP1-208ENST00000521216 ZC3H12CQ9C0D7 883 aaKnown RBP8.55□□□□□ -1.04
SKP1-208ENST00000521216 USP21Q9UK80 565 aa8.55□□□□□ -1.04
SKP1-208ENST00000521216 DLL1O00548 723 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 ENC1O14682 589 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 PAGE1O75459 146 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 APBA3O96018 575 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 CYP11A1P05108 521 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
SKP1-208ENST00000521216 DUOXA2Q1HG44 320 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 SV2BQ7L1I2 683 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 SULF2Q8IWU5 870 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 SAMM50Q9Y512 469 aa8.54□□□□□ -1.04
SKP1-208ENST00000521216 F6X3S4 739 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 ADAM11O75078 769 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 MAOBP27338 520 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 POU4F3Q15319 338 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 LDLRAD1Q5T700 205 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 IGF2-ASQ6U949 168 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 UBASH3BQ8TF42 649 aa8.53□□□□□ -1.04
SKP1-208ENST00000521216 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
SKP1-208ENST00000521216 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
SKP1-208ENST00000521216 NME2P22392 152 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 ZNF76P36508 570 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 AP3B2Q13367 1082 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 ACAD11Q709F0 780 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 STK35Q8TDR2 534 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 KCNB2Q92953 911 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 GGT7Q9UJ14 662 aa8.52□□□□□ -1.05
SKP1-208ENST00000521216 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
SKP1-208ENST00000521216 TM4SF5O14894 197 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 ECEL1O95672 775 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 SELPP16109 830 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 LMNB1P20700 586 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 ARNTP27540 789 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 PCNX4Q63HM2 1172 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 TTBK2Q6IQ55 1244 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 ANKRD24Q8TF21 1146 aa8.51□□□□□ -1.05
SKP1-208ENST00000521216 NOC4LQ9BVI4 516 aaKnown RBP8.51□□□□□ -1.05
SKP1-208ENST00000521216 WISP1O95388 367 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
SKP1-208ENST00000521216 HS2ST1Q7LGA3 356 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 RELL1Q8IUW5 271 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 GRIN3AQ8TCU5 1115 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 RNF34Q969K3 372 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 EMILIN2Q9BXX0 1053 aa8.5□□□□□ -1.05
SKP1-208ENST00000521216 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
SKP1-208ENST00000521216 LOC100289279A0A1B0GTE1 492 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 MINDY4BA8MYZ0 360 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 C9orf172C9J069 976 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 ALX3O95076 343 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
SKP1-208ENST00000521216 BMP6P22004 513 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 LIG3P49916 1009 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
SKP1-208ENST00000521216 AGGF1Q8N302 714 aaeCLIP8.49□□□□□ -1.05
SKP1-208ENST00000521216 RUSC1Q9BVN2 902 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 RAD18Q9NS91 495 aa8.49□□□□□ -1.05
SKP1-208ENST00000521216 CTSBP07858 339 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 RLBP1P12271 317 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
SKP1-208ENST00000521216 FANCCQ00597 558 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 RASSF7Q02833 373 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 LRRC14Q15048 493 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 LENG1Q96BZ8 264 aaPredicted RBP8.48□□□□□ -1.05
SKP1-208ENST00000521216 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 COPRSQ9NQ92 184 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
SKP1-208ENST00000521216 TLR6Q9Y2C9 796 aa8.48□□□□□ -1.05
SKP1-208ENST00000521216 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 DLGAP3O95886 979 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 RASIP1Q5U651 963 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 ACSBG1Q96GR2 724 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 NRSN2Q9GZP1 204 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 KBTBD4Q9NVX7 518 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
SKP1-208ENST00000521216 TCF3P15923 654 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 LIG1P18858 919 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 HDLBPQ00341 1268 aaKnown RBP8.46□□□□□ -1.06
SKP1-208ENST00000521216 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
SKP1-208ENST00000521216 EXOSC6Q5RKV6 272 aaKnown RBP8.46□□□□□ -1.06
SKP1-208ENST00000521216 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.06
SKP1-208ENST00000521216 NUTM2GQ5VZR2 741 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 MPRIPQ6WCQ1 1025 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 CCDC86Q9H6F5 360 aaKnown RBP8.46□□□□□ -1.06
SKP1-208ENST00000521216 AKTIPQ9H8T0 292 aa8.46□□□□□ -1.06
SKP1-208ENST00000521216 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
SKP1-208ENST00000521216 IREB2P48200 963 aaKnown RBP8.45□□□□□ -1.06
SKP1-208ENST00000521216 KCNMA1Q12791 1236 aa8.45□□□□□ -1.06
SKP1-208ENST00000521216 PWP1Q13610 501 aa8.45□□□□□ -1.06
SKP1-208ENST00000521216 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms