RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 SDSP20132 328 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 RASSF7Q02833 373 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 TTLL5Q6EMB2 1281 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
ARFGEF1-202ENST00000517955 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 GOLIM4O00461 696 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 MMP14P50281 582 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 DACT2Q5SW24 774 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 PI16Q6UXB8 463 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 MRIQ9BWK5 157 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 IQSEC3Q9UPP2 1182 aaPredicted RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
ARFGEF1-202ENST00000517955 MAP3K13O43283 966 aa13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 GTF2IP78347 998 aa13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 PELP1Q8IZL8 1130 aaKnown RBP13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 ANTXR1Q9H6X2 564 aa13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 AK9Q5TCS8 1911 aa13.86□□□□□ -0.19
ARFGEF1-202ENST00000517955 TRIM6-TRIM34B2RNG4 842 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 HIP1O00291 1037 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 MAP3K12Q12852 859 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 GSE1Q14687 1217 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 TNIP1Q15025 636 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 MFSD14BQ5SR56 506 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 EDC3Q96F86 508 aaKnown RBP13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
ARFGEF1-202ENST00000517955 MYH7P12883 1935 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 MAP4K4O95819 1239 aaPredicted RBP13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 CXCL9Q07325 125 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 UBE3CQ15386 1083 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 AGBL3Q8NEM8 1001 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 RILPL2Q969X0 211 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 GMLQ99445 158 aa13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
ARFGEF1-202ENST00000517955 PSMD14O00487 310 aa13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 RPS12P25398 132 aaKnown RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 EIF6P56537 245 aaKnown RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 HDLBPQ00341 1268 aaKnown RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 CERS5Q8N5B7 392 aa13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 FSD1Q9BTV5 496 aa13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 LRP2BPQ9P2M1 347 aa13.83□□□□□ -0.2
ARFGEF1-202ENST00000517955 TCRBV5S4A2TA0A5A2 114 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 CHMLP26374 656 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 ADD2P35612 726 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 C9orf131Q5VYM1 1079 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 DPF2Q92785 391 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 RNF181Q9P0P0 153 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 ABCF2Q9UG63 623 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 MAST3O60307 1309 aa13.82□□□□□ -0.2
ARFGEF1-202ENST00000517955 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 CDC45O75419 566 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 IDH1O75874 414 aaKnown RBP13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 RAD17O75943 681 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 PDE6AP16499 860 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 PRDX5P30044 214 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 GSTO1P78417 241 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 SLC9C2Q5TAH2 1124 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 SLF2Q8IX21 1173 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 GPC2Q8N158 579 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 ZNF384Q8TF68 577 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 HELLSQ9NRZ9 838 aa13.81□□□□□ -0.2
ARFGEF1-202ENST00000517955 EIF5BO60841 1220 aaKnown RBP13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 LDHCP07864 332 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 MECOMQ03112 1051 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 GRIK5Q16478 980 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 HHIPL2Q6UWX4 724 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 CERS3Q8IU89 383 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 APPBP2Q92624 585 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 RAI14Q9P0K7 980 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 JAG2Q9Y219 1238 aa13.8□□□□□ -0.2
ARFGEF1-202ENST00000517955 TIAM2Q8IVF5 1701 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 PPP4CP60510 307 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 MXD3Q9BW11 206 aa13.79□□□□□ -0.2
ARFGEF1-202ENST00000517955 GAKO14976 1311 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms