RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 VPS37DQ86XT2 251 aa12.7□□□□□ -0.38
CPEB4-203ENST00000517880 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
CPEB4-203ENST00000517880 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
CPEB4-203ENST00000517880 GTF3C6Q969F1 213 aa12.7□□□□□ -0.38
CPEB4-203ENST00000517880 LRP2BPQ9P2M1 347 aa12.7□□□□□ -0.38
CPEB4-203ENST00000517880 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
CPEB4-203ENST00000517880 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.69□□□□□ -0.38
CPEB4-203ENST00000517880 FOXP2O15409 715 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
CPEB4-203ENST00000517880 ST3GAL1Q11201 340 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
CPEB4-203ENST00000517880 MAGEB6Q8N7X4 407 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 TMEM87AQ8NBN3 555 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 BRF1Q92994 677 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
CPEB4-203ENST00000517880 FSD2A1L4K1 749 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 PLSCR1O15162 318 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
CPEB4-203ENST00000517880 PHF14O94880 888 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 APPP05067 770 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 ST5P78524 1137 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 GRAPQ13588 217 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 TTLL5Q6EMB2 1281 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 SMIM5Q71RC9 77 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 GRAPLQ8TC17 118 aaPredicted RBP12.68□□□□□ -0.38
CPEB4-203ENST00000517880 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
CPEB4-203ENST00000517880 TCEANC2Q96MN5 208 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
CPEB4-203ENST00000517880 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 SNAP23O00161 211 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 TRIM37O94972 964 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 GZF1Q9H116 711 aaPredicted RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
CPEB4-203ENST00000517880 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
CPEB4-203ENST00000517880 MBD4O95243 580 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 GYS1P13807 737 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 GYG1P46976 350 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 MRE11P49959 708 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
CPEB4-203ENST00000517880 C15orf52Q6ZUT6 534 aaKnown RBP12.66□□□□□ -0.38
CPEB4-203ENST00000517880 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 IFNL3Q8IZI9 196 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 SYAP1Q96A49 352 aaPredicted RBP12.66□□□□□ -0.38
CPEB4-203ENST00000517880 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
CPEB4-203ENST00000517880 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
CPEB4-203ENST00000517880 MYO5AQ9Y4I1 1855 aaKnown RBP12.66□□□□□ -0.38
CPEB4-203ENST00000517880 PRC1O43663 620 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 SERPINB2P05120 415 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 CYP7A1P22680 504 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
CPEB4-203ENST00000517880 STK3Q13188 491 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 COL9A3Q14050 684 aaPredicted RBP12.65□□□□□ -0.38
CPEB4-203ENST00000517880 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 RPGRQ92834 1020 aaKnown RBP12.65□□□□□ -0.38
CPEB4-203ENST00000517880 KRT23Q9C075 422 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 NAPBQ9H115 298 aa12.65□□□□□ -0.38
CPEB4-203ENST00000517880 ZSCAN16Q9H4T2 348 aaPredicted RBP12.65□□□□□ -0.38
CPEB4-203ENST00000517880 GSG1L2A8MUP6 293 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 BBOX1O75936 387 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 ZNF445P59923 1031 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 HAND2P61296 217 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 SCRN1Q12765 414 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
CPEB4-203ENST00000517880 RAI14Q9P0K7 980 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 SLC4A4Q9Y6R1 1079 aa12.64□□□□□ -0.39
CPEB4-203ENST00000517880 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
CPEB4-203ENST00000517880 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
CPEB4-203ENST00000517880 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
CPEB4-203ENST00000517880 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 CRAMP1Q96RY5 1269 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 ARMT1Q9H993 441 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 TAF1P21675 1872 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 XDHP47989 1333 aa12.63□□□□□ -0.39
CPEB4-203ENST00000517880 COL4A1P02462 1669 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms