RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 PAPPAQ13219 1627 aa7.25□□□□□ -1.25
CD47-205ENST00000517766 AFDNP55196 1824 aaKnown RBP7.24□□□□□ -1.25
CD47-205ENST00000517766 IBTKQ9P2D0 1353 aaPredicted RBP7.24□□□□□ -1.25
CD47-205ENST00000517766 TMEM88BA6NKF7 163 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 ERVV-2B6SEH9 535 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 CYP27B1O15528 508 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 ALDH1L1O75891 902 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 CABP4P57796 275 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 ATP8B2P98198 1209 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 EML3Q32P44 896 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 BMP2KLQ5H9B9 411 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 TMEM164Q5U3C3 297 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
CD47-205ENST00000517766 ZNF594Q96JF6 807 aaPredicted RBP7.24□□□□□ -1.25
CD47-205ENST00000517766 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 PHAXQ9H814 394 aaKnown RBP7.24□□□□□ -1.25
CD47-205ENST00000517766 ITGB4P16144 1822 aa7.24□□□□□ -1.25
CD47-205ENST00000517766 COL16A1Q07092 1604 aaPredicted RBP7.23□□□□□ -1.25
CD47-205ENST00000517766 AK9Q5TCS8 1911 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L21D6R901 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 WNT7AO00755 349 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 SNRPA1P09661 255 aaKnown RBP7.23□□□□□ -1.25
CD47-205ENST00000517766 UBTFL1P0CB47 393 aaPredicted RBP7.23□□□□□ -1.25
CD47-205ENST00000517766 BMP1P13497 986 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 KSR2Q6VAB6 950 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 OGFOD1Q8N543 542 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 ZNF592Q92610 1267 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 C1QTNF2Q9BXJ5 285 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 PCDHB11Q9Y5F2 797 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 ARFGEF2Q9Y6D5 1785 aa7.23□□□□□ -1.25
CD47-205ENST00000517766 TUBGCP6Q96RT7 1819 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 NWD2Q9ULI1 1742 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 MSTNO14793 375 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 LGR5O75473 907 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 CLDN10P78369 228 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 BEND3Q5T5X7 828 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 KCTD15Q96SI1 283 aaPredicted RBP7.22□□□□□ -1.25
CD47-205ENST00000517766 SPOCK3Q9BQ16 436 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 USP44Q9H0E7 712 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 STRN4Q9NRL3 753 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 KIAA1024Q9UPX6 916 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 USTQ9Y2C2 406 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 LRP6O75581 1613 aa7.22□□□□□ -1.25
CD47-205ENST00000517766 ADCY9O60503 1353 aa7.21□□□□□ -1.25
CD47-205ENST00000517766 NRAPQ86VF7 1730 aa7.21□□□□□ -1.25
CD47-205ENST00000517766 TOGARAM1Q9Y4F4 1720 aa7.21□□□□□ -1.25
CD47-205ENST00000517766 TOM1O60784 492 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 RAB11FIP3O75154 756 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 ITGB2P05107 769 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 PTK7Q13308 1070 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 SLC39A6Q13433 755 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 RC3H1Q5TC82 1133 aaKnown RBP7.21□□□□□ -1.26
CD47-205ENST00000517766 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
CD47-205ENST00000517766 ANP32EQ9BTT0 268 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 GZF1Q9H116 711 aaPredicted RBP7.21□□□□□ -1.26
CD47-205ENST00000517766 BTG4Q9NY30 223 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 NOD1Q9Y239 953 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 MAP3K2Q9Y2U5 619 aa7.21□□□□□ -1.26
CD47-205ENST00000517766 LRRFIP2Q9Y608 721 aaKnown RBP7.21□□□□□ -1.26
CD47-205ENST00000517766 GLI3P10071 1580 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 ATP5J2-PTCD1G3V325 749 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 PDE4CQ08493 712 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 NEXNQ0ZGT2 675 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 DPYDQ12882 1025 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 BECN1Q14457 450 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 NBPF20Q3BBV1 942 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 HSP90AB4PQ58FF6 505 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 TTC22Q5TAA0 569 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 LINS1Q8NG48 757 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 FAM200AQ8TCP9 573 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 SSH3Q8TE77 659 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 ZNF496Q96IT1 587 aaPredicted RBP7.2□□□□□ -1.26
CD47-205ENST00000517766 TBC1D32Q96NH3 1257 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 LRRCC1Q9C099 1032 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 OSBPL3Q9H4L5 887 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 DNAAF2Q9NVR5 837 aaKnown RBP7.2□□□□□ -1.26
CD47-205ENST00000517766 TLL2Q9Y6L7 1015 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 NUP188Q5SRE5 1749 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 KAT6BQ8WYB5 2073 aa7.2□□□□□ -1.26
CD47-205ENST00000517766 DISP2A7MBM2 1401 aa7.19□□□□□ -1.26
CD47-205ENST00000517766 KCPQ6ZWJ8 1503 aa7.19□□□□□ -1.26
CD47-205ENST00000517766 PRAMEF22A3QJZ6 481 aa7.19□□□□□ -1.26
CD47-205ENST00000517766 FAM196BA6NMK8 535 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms