RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 JADE2Q9NQC1 790 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 KDM5DQ9BY66 1539 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 KIF4AO95239 1232 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 PTGS1P23219 599 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 SEPT11Q9NVA2 429 aaKnown RBP13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 FAM76AQ8TAV0 307 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 ZBTB43O43298 467 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 APBB1IPQ7Z5R6 666 aaPredicted RBP13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 C6orf50Q9HD87 102 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
PCDHGA6-201ENST00000517434 PHACTR2O75167 634 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 GJB2P29033 226 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 INPP5BP32019 993 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 BIN1O00499 593 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 UBASH3AP57075 661 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 PUM3Q15397 648 aaKnown RBP13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 DMTNQ08495 405 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 CARD10Q9BWT7 1032 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 GLT8D2Q9H1C3 349 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 A6NNZ2 444 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 IGHDP01880 384 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 TUBB8Q3ZCM7 444 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
PCDHGA6-201ENST00000517434 TBCAO75347 108 aaKnown RBP13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 CCDC50Q8IVM0 306 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 MEIS3Q99687 375 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 EYA2O00167 538 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 CCDC155Q8N6L0 562 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 BIN2Q9UBW5 565 aaPredicted RBP13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 MYO5CQ9NQX4 1742 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 CTAGE9A4FU28 777 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 DNA2P51530 1060 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 IVNS1ABPQ9Y6Y0 642 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 RAD50Q92878 1312 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 RNF113AO15541 343 aaKnown RBP13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 RTN1Q16799 776 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
PCDHGA6-201ENST00000517434 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 TTC22Q5TAA0 569 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 IQSEC3Q9UPP2 1182 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 IL13P35225 146 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 EVCP57679 992 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 PLXNC1O60486 1568 aa13.85□□□□□ -0.19
PCDHGA6-201ENST00000517434 RRP36Q96EU6 259 aaKnown RBP13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 ZEB2O60315 1214 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 SYT1P21579 422 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 GNA11P29992 359 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 TYRO3Q06418 890 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 DNAJC10Q8IXB1 793 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 CCDC160A6NGH7 325 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 KRT27Q7Z3Y8 459 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 RBSNQ9H1K0 784 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 VAMP4O75379 141 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 ANAPC15P60006 121 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 AFAP1L1Q8TED9 768 aa13.84□□□□□ -0.19
PCDHGA6-201ENST00000517434 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 HAND2P61296 217 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 ZSCAN26Q16670 478 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 LMNTD2Q8IXW0 634 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 SLC26A6Q9BXS9 759 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 PNMA2Q9UL42 364 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 MROH5Q6ZUA9 1318 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 ZNF445P59923 1031 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 PPP2R3AQ06190 1150 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 SYCP3Q8IZU3 236 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 DNAJC25Q9H1X3 360 aa13.83□□□□□ -0.2
PCDHGA6-201ENST00000517434 SBNO2Q9Y2G9 1366 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms