RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 PTPRFP10586 1907 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 A0A087WWV3 80 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 GOLGA8BA8MQT2 603 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 UBE2Q2LH0YL09 131 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ZBTB22O15209 634 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PRC1O43663 620 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PDE8AO60658 829 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KDM4AO75164 1064 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 FGAP02671 866 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ZFYP08048 801 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 HMGB1P09429 215 aaKnown RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PDIA4P13667 645 aaKnown RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 GPTP24298 496 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CDC25BP30305 580 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 GTF2F1P35269 517 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CRKLP46109 303 aaKnown RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KCNJ4P48050 445 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 HMGN5P82970 282 aaKnown RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KIF23Q02241 960 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 UBE3CQ15386 1083 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ALX1Q15699 326 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCDC144BQ3MJ40 725 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ANO6Q4KMQ2 910 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 AXDND1Q5T1B0 1012 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 APOA5Q6Q788 366 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KIF6Q6ZMV9 814 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 C3orf67Q6ZVT6 689 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 NBPF11Q86T75 865 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SLC51AQ86UW1 340 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SGMS1Q86VZ5 419 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCDC144CPQ8IYA2 1237 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 FMR1NBQ8N0W7 255 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ZNF710Q8N1W2 664 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 C17orf53Q8N3J3 647 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 MARCH10Q8NA82 808 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 TRIM44Q96DX7 344 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 DDX11Q96FC9 970 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 AIFM3Q96NN9 605 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SCAND2PQ9GZW5 306 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 HSD3B7Q9H2F3 369 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 LY9Q9HBG7 655 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 GJB4Q9NTQ9 266 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 RCOR1Q9UKL0 485 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 HPSEQ9Y251 543 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CHMP3Q9Y3E7 222 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PDS5AQ29RF7 1337 aaKnown RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PNPLA7Q6ZV29 1317 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CNTNAP4Q9C0A0 1308 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 COL11A1P12107 1806 aaPredicted RBP3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PHIPQ8WWQ0 1821 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KIAA1217Q5T5P2 1943 aa3.83□□□□□ -1.8
SCARNA20.6-201ENST00000517251 OTOFQ9HC10 1997 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 RLFQ13129 1914 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 DOCK5Q9H7D0 1870 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ZNF532Q9HCE3 1301 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KLF18A0A0U1RQI7 1052 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 A0A1W2PQ27 194 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 A0A1W2PQ64 194 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 A0A1W2PQD8 194 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SMIM22K7EJ46 135 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SNAP23O00161 211 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 IRS4O14654 1257 aaPredicted RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 RGL2O15211 777 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 LETM1O95202 739 aaPredicted RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PDE8BO95263 885 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 YEATS4O95619 227 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCDC192P0DO97 292 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CDC27P30260 824 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ZNF75DP51815 510 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 FOSBP53539 338 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 HAND2P61296 217 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCZ1BP86790 482 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCZ1P86791 482 aaPredicted RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 FAM160A1Q05DH4 1040 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 KIAA2012Q0VF49 1180 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 FUT2Q10981 343 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 IFIT5Q13325 482 aaKnown RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PTPAQ15257 358 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 PUM3Q15397 648 aaKnown RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 NPY5RQ15761 445 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CSPP1Q1MSJ5 1256 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCDC57Q2TAC2 916 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 TTC39AQ5SRH9 613 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 MYSM1Q5VVJ2 828 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SUSD4Q5VX71 490 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CCDC102BQ68D86 513 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 BARGINQ6ZT62 677 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CHST3Q7LGC8 479 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 ADGRA1Q86SQ6 560 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 AMIGO3Q86WK7 504 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 DZIP3Q86Y13 1208 aaKnown RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 DHX40Q8IX18 779 aaKnown RBP3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 CKAP2LQ8IYA6 745 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 LINC00301Q8NCQ3 95 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 STAG1Q8WVM7 1258 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 SPATA32Q96LK8 384 aa3.82□□□□□ -1.8
SCARNA20.6-201ENST00000517251 AK7Q96M32 723 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms