RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 SEPT6Q14141 434 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-211ENST00000515289 WDR44Q5JSH3 913 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
NPHP3-211ENST00000515289 LIAT1Q6ZQX7 453 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 CEP63Q96MT8 703 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 ZFAND3Q9H8U3 227 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
NPHP3-211ENST00000515289 TLR3O15455 904 aaKnown RBP9.02□□□□□ -0.97
NPHP3-211ENST00000515289 GJB6O95452 261 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 ASMTLO95671 621 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 MCM4P33991 863 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 CDKN1CP49918 316 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-211ENST00000515289 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-211ENST00000515289 ST13P5Q8NFI4 369 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-211ENST00000515289 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 TNKS2Q9H2K2 1166 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 TCEAL9Q9UHQ7 104 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 ERCC6Q03468 1493 aa9.02□□□□□ -0.97
NPHP3-211ENST00000515289 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 FAM221AA4D161 298 aa9.01□□□□□ -0.97
NPHP3-211ENST00000515289 KCNQ2O43526 872 aa9.01□□□□□ -0.97
NPHP3-211ENST00000515289 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 ADAMTS12P58397 1594 aa9.01□□□□□ -0.97
NPHP3-211ENST00000515289 LSRQ86X29 649 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 PLD4Q96BZ4 506 aa9.01□□□□□ -0.97
NPHP3-211ENST00000515289 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 CD2APQ9Y5K6 639 aa9.01□□□□□ -0.97
NPHP3-211ENST00000515289 AQRO60306 1485 aaKnown RBP eCLIP9.01□□□□□ -0.97
NPHP3-211ENST00000515289 CNGA1P29973 690 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
NPHP3-211ENST00000515289 SSRP1Q08945 709 aaKnown RBP9□□□□□ -0.97
NPHP3-211ENST00000515289 BRDTQ58F21 947 aaPredicted RBP9□□□□□ -0.97
NPHP3-211ENST00000515289 RPS26P11Q5JNZ5 115 aaPredicted RBP9□□□□□ -0.97
NPHP3-211ENST00000515289 JAMLQ86YT9 394 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 MEIOBQ8N635 442 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 C19orf47Q8N9M1 422 aaKnown RBP9□□□□□ -0.97
NPHP3-211ENST00000515289 CNTNAP3BQ96NU0 1288 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 ZKSCAN3Q9BRR0 538 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 CNTNAP3Q9BZ76 1288 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 MIR1-1HGQ9H1L0 117 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 PFDN2Q9UHV9 154 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 ZMYM5Q9UJ78 669 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 GRIN2BQ13224 1484 aa9□□□□□ -0.97
NPHP3-211ENST00000515289 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 A0A1W2PNR3 127 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 TIMP2P16035 220 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 LMNB1P20700 586 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 TM4SF20Q53R12 229 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
NPHP3-211ENST00000515289 TMED8Q6PL24 325 aaPredicted RBP8.99□□□□□ -0.97
NPHP3-211ENST00000515289 SPATC1Q76KD6 591 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 REC114Q7Z4M0 266 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 ZSWIM2Q8NEG5 633 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 CHAC2Q8WUX2 184 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 INSM2Q96T92 566 aaPredicted RBP8.99□□□□□ -0.97
NPHP3-211ENST00000515289 OSMRQ99650 979 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 RBSNQ9H1K0 784 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 BRD7Q9NPI1 651 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 PBRM1Q86U86 1689 aa8.99□□□□□ -0.97
NPHP3-211ENST00000515289 CILPO75339 1184 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 PAGE1O75459 146 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 KIF4AO95239 1232 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 POU3F3P20264 500 aaPredicted RBP8.98□□□□□ -0.97
NPHP3-211ENST00000515289 MSX1P28360 303 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 PMLP29590 882 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 STAT3P40763 770 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 GRIA4P48058 902 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 RHBDL3P58872 404 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 TMEM67Q5HYA8 995 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 CCSAPQ6IQ19 270 aaPredicted RBP8.98□□□□□ -0.97
NPHP3-211ENST00000515289 THNSL2Q86YJ6 484 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 MFSD3Q96ES6 412 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 BRMS1Q9HCU9 246 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 GJA3Q9Y6H8 435 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 EFCAB5A4FU69 1503 aa8.98□□□□□ -0.97
NPHP3-211ENST00000515289 ALG1L2C9J202 215 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 SPINT1O43278 529 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 MMP20O60882 483 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 SASH3O75995 380 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 DDAH1O94760 285 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 KCNQ4P56696 695 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 EVA1CP58658 441 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 CLCQ05315 142 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 POU4F2Q12837 409 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 SAMD5Q5TGI4 173 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 GK5Q6ZS86 529 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 NINJ1Q92982 152 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-211ENST00000515289 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
NPHP3-211ENST00000515289 BHLHE41Q9C0J9 482 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-211ENST00000515289 CTTNBP2Q8WZ74 1663 aa8.97□□□□□ -0.97
NPHP3-211ENST00000515289 LONRF2Q1L5Z9 754 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms