RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 PI16Q6UXB8 463 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 KRT26Q7Z3Y9 468 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 USP48Q86UV5 1035 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 DNAJC2Q99543 621 aaKnown RBP17.72■□□□□ 0.43
SNF8-212ENST00000514089 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
SNF8-212ENST00000514089 SALL1Q9NSC2 1324 aa17.72■□□□□ 0.43
SNF8-212ENST00000514089 DICER1Q9UPY3 1922 aaKnown RBP17.71■□□□□ 0.43
SNF8-212ENST00000514089 IGHDP01880 384 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 PRDX5P30044 214 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 ZAP70P43403 619 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 GSTO1P78417 241 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
SNF8-212ENST00000514089 CLRN2A0PK11 232 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 ZBTB22O15209 634 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 LDHCP07864 332 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 MTMR14Q8NCE2 650 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 PRMT6Q96LA8 375 aaPredicted RBP17.7■□□□□ 0.42
SNF8-212ENST00000514089 NOL10Q9BSC4 688 aaKnown RBP17.7■□□□□ 0.42
SNF8-212ENST00000514089 MRIQ9BWK5 157 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 GLIS2Q9BZE0 524 aaPredicted RBP17.7■□□□□ 0.42
SNF8-212ENST00000514089 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
SNF8-212ENST00000514089 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
SNF8-212ENST00000514089 TTF1Q15361 905 aaPredicted RBP17.69■□□□□ 0.42
SNF8-212ENST00000514089 HHIPL2Q6UWX4 724 aa17.69■□□□□ 0.42
SNF8-212ENST00000514089 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
SNF8-212ENST00000514089 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
SNF8-212ENST00000514089 ERC2O15083 957 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 CYP2E1P05181 493 aaPredicted RBP17.68■□□□□ 0.42
SNF8-212ENST00000514089 ATP5JP18859 108 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 MECOMQ03112 1051 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 MAP3K12Q12852 859 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 DIXDC1Q155Q3 683 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 APOBEC3FQ8IUX4 373 aaKnown RBP17.68■□□□□ 0.42
SNF8-212ENST00000514089 ZDHHC15Q96MV8 337 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 LNPKQ9C0E8 428 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
SNF8-212ENST00000514089 PCDHAC2Q9Y5I4 1007 aa17.68■□□□□ 0.42
SNF8-212ENST00000514089 GOLIM4O00461 696 aa17.67■□□□□ 0.42
SNF8-212ENST00000514089 TRAF5O00463 557 aa17.67■□□□□ 0.42
SNF8-212ENST00000514089 NAA16Q6N069 864 aaPredicted RBP17.67■□□□□ 0.42
SNF8-212ENST00000514089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNF8-212ENST00000514089 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
SNF8-212ENST00000514089 ADM5C9JUS6 153 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 ITGBL1O95965 494 aaPredicted RBP17.66■□□□□ 0.42
SNF8-212ENST00000514089 TNNI2P48788 182 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 APLP1P51693 650 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 TNFAIP1Q13829 316 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 CHD1LQ86WJ1 897 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
SNF8-212ENST00000514089 SCAF8Q9UPN6 1271 aaKnown RBP17.66■□□□□ 0.42
SNF8-212ENST00000514089 PITPNM2Q9BZ72 1349 aa17.66■□□□□ 0.42
SNF8-212ENST00000514089 TCP10L2B9ZVM9 353 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
SNF8-212ENST00000514089 BAG3O95817 575 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 HSPA6P17066 643 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 MX1P20591 662 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 NF2P35240 595 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 PIH1D3Q9NQM4 214 aaKnown RBP17.65■□□□□ 0.42
SNF8-212ENST00000514089 PAG1Q9NWQ8 432 aa17.65■□□□□ 0.42
SNF8-212ENST00000514089 COL1A1P02452 1464 aaPredicted RBP17.64■□□□□ 0.41
SNF8-212ENST00000514089 NUCB1Q02818 461 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 TSHZ3Q63HK5 1081 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
SNF8-212ENST00000514089 NSUN4Q96CB9 384 aaKnown RBP17.64■□□□□ 0.41
SNF8-212ENST00000514089 ZBED3Q96IU2 234 aaPredicted RBP17.64■□□□□ 0.41
SNF8-212ENST00000514089 HAUS7Q99871 368 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNF8-212ENST00000514089 DEFB129Q9H1M3 183 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 DAGLAQ9Y4D2 1042 aa17.64■□□□□ 0.41
SNF8-212ENST00000514089 TMEM88BA6NKF7 163 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 IGSF3O75054 1194 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
SNF8-212ENST00000514089 CYP7A1P22680 504 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 BTDP43251 543 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 TTLL12Q14166 644 aaPredicted RBP17.63■□□□□ 0.41
SNF8-212ENST00000514089 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 ABT1Q9ULW3 272 aaKnown RBP17.63■□□□□ 0.41
SNF8-212ENST00000514089 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 SCN4AP35499 1836 aa17.63■□□□□ 0.41
SNF8-212ENST00000514089 RASA3Q14644 834 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 SUPT20HL1Q3ZLR7 823 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 SLC9C2Q5TAH2 1124 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 C2orf69Q8N8R5 385 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
SNF8-212ENST00000514089 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
SNF8-212ENST00000514089 FAM163AQ96GL9 167 aaPredicted RBP17.62■□□□□ 0.41
SNF8-212ENST00000514089 MROH7-TTC4A0A0A0MT08 1334 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms