RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DHX58Q96C10 678 aa17.08■□□□□ 0.33
USP38-202ENST00000510377 CLIC6Q96NY7 704 aa17.08■□□□□ 0.33
USP38-202ENST00000510377 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.33
USP38-202ENST00000510377 ADKP55263 362 aaKnown RBP17.08■□□□□ 0.32
USP38-202ENST00000510377 FAM89AQ96GI7 184 aa17.08■□□□□ 0.32
USP38-202ENST00000510377 PPP1R13BQ96KQ4 1090 aa17.08■□□□□ 0.32
USP38-202ENST00000510377 IGKV5-2P06315 115 aa17.08■□□□□ 0.32
USP38-202ENST00000510377 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
USP38-202ENST00000510377 HAUS7Q99871 368 aa17.08■□□□□ 0.32
USP38-202ENST00000510377 EYA2O00167 538 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 ATL3Q6DD88 541 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 SEC31AO94979 1220 aaKnown RBP17.07■□□□□ 0.32
USP38-202ENST00000510377 KMT5BQ4FZB7 885 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 WASF1Q92558 559 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 ST7Q9NRC1 585 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 MARCH6O60337 910 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
USP38-202ENST00000510377 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 NEK11Q8NG66 645 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
USP38-202ENST00000510377 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 IMPACTQ9P2X3 320 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 GPAA1O43292 621 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 ZAP70P43403 619 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
USP38-202ENST00000510377 KRT40Q6A162 431 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
USP38-202ENST00000510377 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
USP38-202ENST00000510377 PPP2R3AQ06190 1150 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 PDE4CQ08493 712 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 RUFY1Q96T51 708 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
USP38-202ENST00000510377 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
USP38-202ENST00000510377 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
USP38-202ENST00000510377 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
USP38-202ENST00000510377 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 N4BP3O15049 544 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
USP38-202ENST00000510377 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
USP38-202ENST00000510377 ZNF569Q5MCW4 686 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 XAGE2Q96GT9 111 aa17.05■□□□□ 0.32
USP38-202ENST00000510377 MAGEC2Q9UBF1 373 aaPredicted RBP17.05■□□□□ 0.32
USP38-202ENST00000510377 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 KCNJ14Q9UNX9 436 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 DSCC1Q9BVC3 393 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 FGAP02671 866 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 CMTR1Q8N1G2 835 aaKnown RBP17.04■□□□□ 0.32
USP38-202ENST00000510377 VPS18Q9P253 973 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 CARMIL3Q8ND23 1372 aa17.04■□□□□ 0.32
USP38-202ENST00000510377 GOLGA6L9A6NEM1 432 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 CDC25BP30305 580 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
USP38-202ENST00000510377 LONRF3Q496Y0 759 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 MFSD6Q6ZSS7 791 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 STAMQ92783 540 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 GOLGA1Q92805 767 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 SRRTQ9BXP5 876 aaKnown RBP17.03■□□□□ 0.32
USP38-202ENST00000510377 EPC1Q9H2F5 836 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 YEATS4O95619 227 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 CCDC175P0C221 793 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 TXLNAP40222 546 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 STOX1Q6ZVD7 989 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 FBXO18Q8NFZ0 1043 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 ANKRD7Q92527 254 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
USP38-202ENST00000510377 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 C10orf67Q8IYJ2 551 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
USP38-202ENST00000510377 CCDC47Q96A33 483 aaKnown RBP17.03■□□□□ 0.32
USP38-202ENST00000510377 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
USP38-202ENST00000510377 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
USP38-202ENST00000510377 DNA2P51530 1060 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 IQCB1Q15051 598 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 KRI1Q8N9T8 703 aaKnown RBP17.02■□□□□ 0.32
USP38-202ENST00000510377 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 MAST3O60307 1309 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.32
USP38-202ENST00000510377 ADORA1P30542 326 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 RTN1Q16799 776 aa17.02■□□□□ 0.32
USP38-202ENST00000510377 ZNHIT6Q9NWK9 470 aaKnown RBP17.02■□□□□ 0.32
USP38-202ENST00000510377 A0A0G2JLW4 131 aa17.02■□□□□ 0.31
USP38-202ENST00000510377 RTEL1Q9NZ71 1219 aa17.02■□□□□ 0.31
USP38-202ENST00000510377 ANGEL1Q9UNK9 670 aaKnown RBP17.02■□□□□ 0.31
USP38-202ENST00000510377 CLCN6P51797 869 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms