RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 NEFMP07197 916 aa10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 ZNF280AP59817 542 aaPredicted RBP10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 CC2D1BQ5T0F9 858 aaKnown RBP10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 ERO1AQ96HE7 468 aa10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 ZC3H12CQ9C0D7 883 aaKnown RBP10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
CALCOCO2-217ENST00000510356 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 PAPPA2Q9BXP8 1791 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 UBE2Q2LH0YL09 131 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 ARHGEF6Q15052 776 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 DIXDC1Q155Q3 683 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 ARMC9Q7Z3E5 817 aa10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 TRMT112Q9UI30 125 aaKnown RBP10.86□□□□□ -0.67
CALCOCO2-217ENST00000510356 MANSC4A6NHS7 340 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 HCLS1P14317 486 aaPredicted RBP10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 MMP14P50281 582 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 USP46P62068 366 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 MYSM1Q5VVJ2 828 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 OTOP1Q7RTM1 612 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 PTPN22Q9Y2R2 807 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 NUP98P52948 1817 aa10.85□□□□□ -0.67
CALCOCO2-217ENST00000510356 MOXD2PA6NHM9 499 aa10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 HOXA2O43364 376 aa10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 EIF4A1P60842 406 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 MYOZ2Q9NPC6 264 aa10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 MIS18AQ9NYP9 233 aa10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 POLLQ9UGP5 575 aa10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 COL3A1P02461 1466 aaPredicted RBP10.84□□□□□ -0.67
CALCOCO2-217ENST00000510356 RTL9Q8NET4 1388 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 EN2P19622 333 aaPredicted RBP10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 DCTN1Q14203 1278 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 NLRP10Q86W26 655 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 OGFOD1Q8N543 542 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 HLA-CQ95604 372 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 PCDHB3Q9Y5E6 796 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 ZNF609O15014 1411 aa10.83□□□□□ -0.68
CALCOCO2-217ENST00000510356 HSP90B1P14625 803 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 NDUFV2P19404 249 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 GPSM2P81274 684 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 SF3B3Q15393 1217 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 TMEM132AQ24JP5 1023 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 SPRYD7Q5W111 196 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 MOB2Q70IA6 237 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 TBC1D16Q8TBP0 767 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 EFCC1Q9HA90 598 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 KCNQ5Q9NR82 932 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 POLR2AP24928 1970 aaKnown RBP10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 ASTN2O75129 1339 aaPredicted RBP10.82□□□□□ -0.68
CALCOCO2-217ENST00000510356 LAMB4A4D0S4 1761 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 UNCXA6NJT0 531 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 ZBTB48P10074 688 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 RPS8P62241 208 aaKnown RBP10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 SLC10A4Q96EP9 437 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 PODXL2Q9NZ53 605 aa10.81□□□□□ -0.68
CALCOCO2-217ENST00000510356 H0YGN5 161 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 COPS2P61201 443 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 MORN1Q5T089 497 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 BLOC1S3Q6QNY0 202 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 RIC3Q7Z5B4 369 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 PODNQ7Z5L7 613 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 CELF1Q92879 486 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 R3HDMLQ9H3Y0 253 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 ANKIB1Q9P2G1 1089 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 GGA1Q9UJY5 639 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 DUOX1Q9NRD9 1551 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
CALCOCO2-217ENST00000510356 USP17L3A6NCW0 530 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 USP17L4A6NCW7 530 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 SP3Q02447 781 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 PTPN12Q05209 780 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 LDLRAD1Q5T700 205 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 USP17L1Q7RTZ2 530 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 APOBEC3FQ8IUX4 373 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 ZNF333Q96JL9 665 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 GMLQ99445 158 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 MYO3BQ8WXR4 1341 aa10.79□□□□□ -0.68
CALCOCO2-217ENST00000510356 SPTLC1O15269 473 aa10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 UFL1O94874 794 aa10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 FDX1P10109 184 aa10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 EIF2S2P20042 333 aaKnown RBP10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 COPS6Q7L5N1 327 aa10.78□□□□□ -0.68
CALCOCO2-217ENST00000510356 MTRQ99707 1265 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms