RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 TGFB2P61812 414 aa18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 FAM227BQ96M60 508 aa18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 DNAJC2Q99543 621 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 GDPD2Q9HCC8 539 aa18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
SQSTM1-213ENST00000510187 CPA1P15085 419 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 BCAMP50895 628 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 TERF1P54274 439 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 HAUS7Q99871 368 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 PODXL2Q9NZ53 605 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 GGA1Q9UJY5 639 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 ZKSCAN5Q9Y2L8 839 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
SQSTM1-213ENST00000510187 UFL1O94874 794 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 ATP2B4P23634 1241 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 KLRK1P26718 216 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 OLFM4Q6UX06 510 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 ARAP2Q8WZ64 1704 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 ZNF512BQ96KM6 892 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 NDUFB9Q9Y6M9 179 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 A0A0D9SFI3 127 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 UQCRFS1P1P0C7P4 283 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 PDCP20941 246 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 KCNA3P22001 575 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 GYG1P46976 350 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 TICAM2Q86XR7 235 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 TTLL6Q8N841 843 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 CD2APQ9Y5K6 639 aa18.97■□□□□ 0.63
SQSTM1-213ENST00000510187 ARID4AP29374 1257 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.631e-6■■□□□ 13.4
SQSTM1-213ENST00000510187 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 SCARF1Q14162 830 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 KRT32Q14532 448 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 ME3Q16798 604 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 BLOC1S2Q6QNY1 142 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 LRRC37AA6NMS7 1700 aa18.96■□□□□ 0.63
SQSTM1-213ENST00000510187 MCAMP43121 646 aa18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 FOXD4L6Q3SYB3 417 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 FOXD4L3Q6VB84 417 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 MPNDQ8N594 471 aa18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 TBC1D16Q8TBP0 767 aa18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 EDC3Q96F86 508 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 FAM84BQ96KN1 310 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 TCHHQ07283 1943 aa18.95■□□□□ 0.62
SQSTM1-213ENST00000510187 C6orf229H3BNL8 230 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 DPP8Q6V1X1 898 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 GNL3LQ9NVN8 582 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 TPCN1Q9ULQ1 816 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 CACNA1SQ13698 1873 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 SLX4Q8IY92 1834 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 DLEC1Q9Y238 1755 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 GOLIM4O00461 696 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 FBXO33Q7Z6M2 555 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 TXNRD3Q86VQ6 643 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 RNF214Q8ND24 703 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 LARP6Q9BRS8 491 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
SQSTM1-213ENST00000510187 IRS2Q9Y4H2 1338 aa18.93■□□□□ 0.62
SQSTM1-213ENST00000510187 HIBADHP31937 336 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-213ENST00000510187 ZAP70P43403 619 aa18.93■□□□□ 0.62
SQSTM1-213ENST00000510187 RASGRF1Q13972 1273 aa18.93■□□□□ 0.62
SQSTM1-213ENST00000510187 FIBPO43427 364 aa18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 C21orf2O43822 256 aa18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 C15orf52Q6ZUT6 534 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 IQSEC3Q9UPP2 1182 aaPredicted RBP18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 ELP1O95163 1332 aa18.92■□□□□ 0.62
SQSTM1-213ENST00000510187 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
SQSTM1-213ENST00000510187 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
SQSTM1-213ENST00000510187 ZNF804AQ7Z570 1209 aa18.91■□□□□ 0.62
SQSTM1-213ENST00000510187 WWC3Q9ULE0 1092 aa18.91■□□□□ 0.62
SQSTM1-213ENST00000510187 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-213ENST00000510187 KIAA1551Q9HCM1 1747 aa18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 KRT85P78386 507 aa18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 DNM1Q05193 864 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 LARP1BQ659C4 914 aaKnown RBP18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 ZNF589Q86UQ0 364 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 KBTBD3Q8NAB2 608 aa18.9■□□□□ 0.62
SQSTM1-213ENST00000510187 VPS37CA5D8V6 355 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 TOB2Q14106 344 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 DALRD3Q5D0E6 543 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 FUCA2Q9BTY2 467 aa18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 GOLGB1Q14789 3259 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-213ENST00000510187 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 SEMA3EO15041 775 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 TTF1Q15361 905 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 CCDC93Q567U6 631 aa18.88■□□□□ 0.61
SQSTM1-213ENST00000510187 ZC3H12CQ9C0D7 883 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms