RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TOB2Q14106 344 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 MLECQ14165 292 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 TEX35Q5T0J7 233 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 FILIP1Q7Z7B0 1213 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCAR1Q8IX12 1150 aaKnown RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCAR2Q8N163 923 aaKnown RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CACTINQ8WUQ7 758 aaKnown RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 IP6K1Q92551 441 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZNF592Q92610 1267 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 BRF1Q92994 677 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 PGBD1Q96JS3 809 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 CALCOCO1Q9P1Z2 691 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 TFIP11Q9UBB9 837 aaKnown RBP5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 AMOTL2Q9Y2J4 779 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 PIK3C2AO00443 1686 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 KDM3BQ7LBC6 1761 aa5.78□□□□□ -1.48
HMGB3P16-201ENST00000508037 NPHP4O75161 1426 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 A0A0D9SFI3 127 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 GOLGA6L9A6NEM1 432 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 ATP8B1O43520 1251 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 SFPQP23246 707 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 GGCXP38435 758 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 LRMPQ12912 555 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 SNW1Q13573 536 aaKnown RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 TERF2Q15554 542 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 MCMDC2Q4G0Z9 681 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZNF530Q6P9A1 599 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 BLOC1S3Q6QNY0 202 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 Q6ZUG5 572 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 DHX32Q7L7V1 743 aaKnown RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 FCHSD1Q86WN1 690 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 ABTB2Q8N961 1025 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 KCNG4Q8TDN1 519 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 MRPS27Q92552 414 aaKnown RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC102AQ96A19 550 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 FAM227BQ96M60 508 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 DDX21Q9NR30 783 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 HELLSQ9NRZ9 838 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 NRBP1Q9UHY1 535 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 COL15A1P39059 1388 aa5.77□□□□□ -1.49
HMGB3P16-201ENST00000508037 PHLPP2Q6ZVD8 1323 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 SH3TC1Q8TE82 1336 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 LMO7Q8WWI1 1683 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 RNMTO43148 476 aaKnown RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZSCAN12O43309 604 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZMYND10O75800 440 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 SASH1O94885 1247 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 YEATS4O95619 227 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ME1P48163 572 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 TUBB4BP68371 445 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 STK3Q13188 491 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 GPS2Q13227 327 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 SF3A1Q15459 793 aaKnown RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ADALQ6DHV7 355 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 BARGINQ6ZT62 677 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 BRAPQ7Z569 592 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 JMYQ8N9B5 988 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 FSIP1Q8NA03 581 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZC3H15Q8WU90 426 aaKnown RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 JARID2Q92833 1246 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 LTV1Q96GA3 475 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 TIGD1Q96MW7 591 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 SDF4Q9BRK5 362 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 DSCC1Q9BVC3 393 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 BOLA2Q9H3K6 86 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 BICC1Q9H694 974 aaKnown RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 L2HGDHQ9H9P8 463 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 COPRSQ9NQ92 184 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 FAM53CQ9NYF3 392 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 PODXL2Q9NZ53 605 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 RTEL1Q9NZ71 1219 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 ZNF215Q9UL58 517 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 TSPOAP1O95153 1857 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 HEG1Q9ULI3 1381 aa5.76□□□□□ -1.49
HMGB3P16-201ENST00000508037 PTPDC1A2A3K4 754 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 IKBKBO14920 756 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 SMC2O95347 1197 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 SLFN14P0C7P3 912 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 GCGRP47871 477 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCZ1BP86790 482 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCZ1P86791 482 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 MDM2Q00987 491 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 STK38Q15208 465 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC144BQ3MJ40 725 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 TNNI3KQ59H18 835 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 JAKMIP3Q5VZ66 844 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 FAM173BQ6P4H8 233 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 TMCO3Q6UWJ1 677 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 C11orf57Q6ZUT1 292 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 RIC3Q7Z5B4 369 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 DHX40Q8IX18 779 aaKnown RBP5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 CCDC144CPQ8IYA2 1237 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 FBXL16Q8N461 479 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 AOPEPQ8N6M6 819 aa5.75□□□□□ -1.49
HMGB3P16-201ENST00000508037 NSUN7Q8NE18 718 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms