RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 SCAF8Q9UPN6 1271 aaKnown RBP34.4■■■■□ 3.1
MSX2-202ENST00000507785 HMG20BQ9P0W2 317 aa34.39■■■■□ 3.1
MSX2-202ENST00000507785 MAST3O60307 1309 aa34.38■■■■□ 3.09
MSX2-202ENST00000507785 RBM5P52756 815 aaKnown RBP eCLIP34.38■■■■□ 3.09
MSX2-202ENST00000507785 KLRG1Q96E93 195 aa34.38■■■■□ 3.09
MSX2-202ENST00000507785 TLR7Q9NYK1 1049 aaKnown RBP34.38■■■■□ 3.09
MSX2-202ENST00000507785 UQCRFS1P1P0C7P4 283 aa34.37■■■■□ 3.09
MSX2-202ENST00000507785 PRDX5P30044 214 aa34.37■■■■□ 3.09
MSX2-202ENST00000507785 APOBEC3FQ8IUX4 373 aaKnown RBP34.37■■■■□ 3.09
MSX2-202ENST00000507785 KIF1BPQ96EK5 621 aa34.37■■■■□ 3.09
MSX2-202ENST00000507785 CDCA5Q96FF9 252 aa34.37■■■■□ 3.09
MSX2-202ENST00000507785 CCDC8Q9H0W5 538 aaPredicted RBP34.37■■■■□ 3.09
MSX2-202ENST00000507785 PCDHB15Q9Y5E8 787 aa34.37■■■■□ 3.09
MSX2-202ENST00000507785 RAB11FIP3O75154 756 aa34.36■■■■□ 3.09
MSX2-202ENST00000507785 TEKT1Q969V4 418 aa34.36■■■■□ 3.09
MSX2-202ENST00000507785 ZNF408Q9H9D4 720 aa34.36■■■■□ 3.09
MSX2-202ENST00000507785 IL1RAPL2Q9NP60 686 aa34.36■■■■□ 3.09
MSX2-202ENST00000507785 MCAMP43121 646 aa34.35■■■■□ 3.09
MSX2-202ENST00000507785 PI16Q6UXB8 463 aa34.35■■■■□ 3.09
MSX2-202ENST00000507785 CNTNAP1P78357 1384 aa34.35■■■■□ 3.09
MSX2-202ENST00000507785 MYO1BO43795 1136 aa34.34■■■■□ 3.09
MSX2-202ENST00000507785 LDHBP07195 334 aaKnown RBP34.34■■■■□ 3.09
MSX2-202ENST00000507785 HHIPL2Q6UWX4 724 aa34.34■■■■□ 3.09
MSX2-202ENST00000507785 ZGPATQ8N5A5 531 aaKnown RBP34.34■■■■□ 3.09
MSX2-202ENST00000507785 SPATA5Q8NB90 893 aa34.34■■■■□ 3.09
MSX2-202ENST00000507785 ZNF512BQ96KM6 892 aaPredicted RBP34.34■■■■□ 3.09
MSX2-202ENST00000507785 ZDHHC15Q96MV8 337 aa34.34■■■■□ 3.09
MSX2-202ENST00000507785 MYH2Q9UKX2 1941 aa34.34■■■■□ 3.09
MSX2-202ENST00000507785 CLRN2A0PK11 232 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 RASSF10A6NK89 507 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 APBB1O00213 710 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 SPDYE2Q495Y8 402 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 CCDC158Q5M9N0 1113 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 TTC39AQ5SRH9 613 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 AACSQ86V21 672 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 TLL2Q9Y6L7 1015 aa34.33■■■■□ 3.09
MSX2-202ENST00000507785 TDRD3Q9H7E2 651 aaKnown RBP34.32■■■■□ 3.08
MSX2-202ENST00000507785 MKRN1Q9UHC7 482 aaKnown RBP34.32■■■■□ 3.08
MSX2-202ENST00000507785 ABT1Q9ULW3 272 aaKnown RBP34.32■■■■□ 3.08
MSX2-202ENST00000507785 SUPT16HQ9Y5B9 1047 aaKnown RBP34.32■■■■□ 3.08
MSX2-202ENST00000507785 ZNF70Q9UC06 446 aaPredicted RBP34.31■■■■□ 3.08
MSX2-202ENST00000507785 APOBEC3HQ6NTF7 200 aaKnown RBP34.3■■■■□ 3.08
MSX2-202ENST00000507785 SAPCD2Q86UD0 394 aa34.3■■■■□ 3.08
MSX2-202ENST00000507785 CLASRPQ8N2M8 674 aaKnown RBP34.3■■■■□ 3.08
MSX2-202ENST00000507785 ABCF2Q9UG63 623 aa34.3■■■■□ 3.08
MSX2-202ENST00000507785 DIXDC1Q155Q3 683 aa34.29■■■■□ 3.08
MSX2-202ENST00000507785 PRAMEF18Q5VWM3 479 aa34.29■■■■□ 3.08
MSX2-202ENST00000507785 DEFB129Q9H1M3 183 aa34.29■■■■□ 3.08
MSX2-202ENST00000507785 DCTPP1Q9H773 170 aa34.29■■■■□ 3.08
MSX2-202ENST00000507785 VEZTQ9HBM0 779 aa34.28■■■■□ 3.08
MSX2-202ENST00000507785 GBA2Q9HCG7 927 aaPredicted RBP34.28■■■■□ 3.08
MSX2-202ENST00000507785 MYO5AQ9Y4I1 1855 aaKnown RBP34.28■■■■□ 3.08
MSX2-202ENST00000507785 DEFB115Q30KQ5 88 aa34.27■■■■□ 3.08
MSX2-202ENST00000507785 SPTY2D1Q68D10 685 aaPredicted RBP34.27■■■■□ 3.08
MSX2-202ENST00000507785 DAGLAQ9Y4D2 1042 aa34.27■■■■□ 3.08
MSX2-202ENST00000507785 PAPPA2Q9BXP8 1791 aa34.26■■■■□ 3.08
MSX2-202ENST00000507785 TBC1D9Q6ZT07 1266 aa34.26■■■■□ 3.08
MSX2-202ENST00000507785 SNRKQ9NRH2 765 aa34.26■■■■□ 3.08
MSX2-202ENST00000507785 PPP2R3BQ9Y5P8 575 aa34.26■■■■□ 3.08
MSX2-202ENST00000507785 ERICH6Q7L0X2 663 aa34.25■■■■□ 3.07
MSX2-202ENST00000507785 JMYQ8N9B5 988 aa34.25■■■■□ 3.07
MSX2-202ENST00000507785 C2orf69Q8N8R5 385 aa34.24■■■■□ 3.07
MSX2-202ENST00000507785 ZNF384Q8TF68 577 aa34.24■■■■□ 3.07
MSX2-202ENST00000507785 HHIPL1Q96JK4 782 aa34.24■■■■□ 3.07
MSX2-202ENST00000507785 LRRCC1Q9C099 1032 aa34.24■■■■□ 3.07
MSX2-202ENST00000507785 GAKO14976 1311 aa34.24■■■■□ 3.07
MSX2-202ENST00000507785 VEGFBP49765 207 aa34.23■■■■□ 3.07
MSX2-202ENST00000507785 AAMPQ13685 434 aa34.23■■■■□ 3.07
MSX2-202ENST00000507785 DZIP1Q86YF9 867 aaKnown RBP34.23■■■■□ 3.07
MSX2-202ENST00000507785 CYP2E1P05181 493 aaPredicted RBP34.22■■■■□ 3.07
MSX2-202ENST00000507785 ZAP70P43403 619 aa34.22■■■■□ 3.07
MSX2-202ENST00000507785 MECOMQ03112 1051 aa34.22■■■■□ 3.07
MSX2-202ENST00000507785 RASA3Q14644 834 aa34.22■■■■□ 3.07
MSX2-202ENST00000507785 FAM163AQ96GL9 167 aaPredicted RBP34.22■■■■□ 3.07
MSX2-202ENST00000507785 MAST2Q6P0Q8 1798 aa34.21■■■■□ 3.07
MSX2-202ENST00000507785 IFIT2P09913 472 aaKnown RBP34.21■■■■□ 3.07
MSX2-202ENST00000507785 TNFAIP1Q13829 316 aa34.21■■■■□ 3.07
MSX2-202ENST00000507785 SSC5DA1L4H1 1573 aa34.2■■■■□ 3.07
MSX2-202ENST00000507785 SMARCA5O60264 1052 aaPredicted RBP34.2■■■■□ 3.07
MSX2-202ENST00000507785 HUNKP57058 714 aa34.2■■■■□ 3.07
MSX2-202ENST00000507785 FKBP1BP68106 108 aa34.2■■■■□ 3.07
MSX2-202ENST00000507785 CDC42EP5Q6NZY7 148 aa34.2■■■■□ 3.07
MSX2-202ENST00000507785 NSUN4Q96CB9 384 aaKnown RBP34.2■■■■□ 3.07
MSX2-202ENST00000507785 TCP10L2B9ZVM9 353 aa34.19■■■■□ 3.06
MSX2-202ENST00000507785 CACNB3P54284 484 aa34.19■■■■□ 3.06
MSX2-202ENST00000507785 FKBP1CQ5VVH2 108 aa34.19■■■■□ 3.06
MSX2-202ENST00000507785 EXOC6Q8TAG9 804 aa34.19■■■■□ 3.06
MSX2-202ENST00000507785 SLF2Q8IX21 1173 aa34.18■■■■□ 3.06
MSX2-202ENST00000507785 MROH7-TTC4A0A0A0MT08 1334 aa34.18■■■■□ 3.06
MSX2-202ENST00000507785 DOCK2Q92608 1830 aa34.18■■■■□ 3.06
MSX2-202ENST00000507785 NF2P35240 595 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 CYP4F22Q6NT55 531 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 MOB2Q70IA6 237 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 CAPNS2Q96L46 248 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 TEPSINQ96N21 525 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 THSD7BQ9C0I4 1608 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 PIH1D3Q9NQM4 214 aaKnown RBP34.17■■■■□ 3.06
MSX2-202ENST00000507785 TMOD2Q9NZR1 351 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 RAI14Q9P0K7 980 aa34.17■■■■□ 3.06
MSX2-202ENST00000507785 LRP2BPQ9P2M1 347 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms