RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 KLF4O43474 513 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 RAB33AQ14088 237 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 RASIP1Q5U651 963 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 ELMSAN1Q6PJG2 1045 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 VN1R5Q7Z5H4 357 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 SULF2Q8IWU5 870 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 JARID2Q92833 1246 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 ANAPC16Q96DE5 110 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 EMILIN2Q9BXX0 1053 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 SMG9Q9H0W8 520 aaKnown RBP7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 R3HCC1Q9Y3T6 440 aaKnown RBP7.83□□□□□ -1.16
HMGB1P3-201ENST00000502802 FAM221AA4D161 298 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 ANKRD62A6NC57 917 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 U2SURPO15042 1029 aaKnown RBP7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 ARNTP27540 789 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 CWF19L2Q2TBE0 894 aaKnown RBP7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 FBXO27Q8NI29 283 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 SHDQ96IW2 340 aa7.82□□□□□ -1.16
HMGB1P3-201ENST00000502802 CILPO75339 1184 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 MCM4P33991 863 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 ZNF165P49910 485 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 SEPT6Q14141 434 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 LLGL2Q6P1M3 1020 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 ADAMTSL4Q6UY14 1074 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 CCDC81Q6ZN84 652 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 HNRNPLLQ8WVV9 542 aaKnown RBP7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 LACRTQ9GZZ8 138 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 CBX8Q9HC52 389 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 FRRS1LQ9P0K9 344 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 NAGPAQ9UK23 515 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 PPT2Q9UMR5 302 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
HMGB1P3-201ENST00000502802 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 ARAFP10398 606 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 ESRRAP11474 423 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 SNRPBP14678 240 aaKnown RBP7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 MX2P20592 715 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 ADH7P40394 386 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 EIF6P56537 245 aaKnown RBP7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 TNNI3KQ59H18 835 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 EGFLAMQ63HQ2 1017 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 JAZF1Q86VZ6 243 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 NLGN1Q8N2Q7 840 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 DDX54Q8TDD1 881 aaKnown RBP7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 FERD3LQ96RJ6 166 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 SRPK1Q96SB4 655 aaKnown RBP7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 LPIN3Q9BQK8 851 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
HMGB1P3-201ENST00000502802 SMAD7O15105 426 aaKnown RBP7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 PPM1GO15355 546 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 BPNT1O95861 308 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 ADH6P28332 368 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 GIPRP48546 466 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 CABP4P57796 275 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 IKBKEQ14164 716 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 SCARA3Q6AZY7 606 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 ZNF662Q6ZS27 426 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 REXO1Q8N1G1 1221 aaKnown RBP7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 CACTIN-AS1Q8N1I8 211 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 GRIN3AQ8TCU5 1115 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 TTC9Q92623 222 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 CRBNQ96SW2 442 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 SH2B1Q9NRF2 756 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P3-201ENST00000502802 CDC27P30260 824 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 FBXW10Q5XX13 1052 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 LRP10Q7Z4F1 713 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 OR6P1Q8NGX9 317 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 GAL3ST3Q96A11 431 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 MRPL42Q9Y6G3 142 aaKnown RBP7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 SBNO2Q9Y2G9 1366 aa7.78□□□□□ -1.16
HMGB1P3-201ENST00000502802 CDK11BP21127 795 aaKnown RBP7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 ZNF252P-AS1Q0IIN9 211 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 AP3B2Q13367 1082 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 GDF6Q6KF10 455 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 PSAPL1Q6NUJ1 521 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 GK5Q6ZS86 529 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 PDZD3Q86UT5 571 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 MDFIQ99750 246 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 ZNRF3Q9ULT6 936 aa7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
HMGB1P3-201ENST00000502802 SOX1O00570 391 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 TRIM37O94972 964 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 IMPDH2P12268 514 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 EPHA1P21709 976 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 MAP2K3P46734 347 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 CLCQ05315 142 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 FCHSD1Q86WN1 690 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 FAM169BQ8N8A8 192 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 DEPDC7Q96QD5 511 aa7.76□□□□□ -1.17
HMGB1P3-201ENST00000502802 SNTG2Q9NY99 539 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms