RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TMED8Q6PL24 325 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-245ENST00000494862 STOX1Q6ZVD7 989 aa13.66□□□□□ -0.22
HDLBP-245ENST00000494862 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
HDLBP-245ENST00000494862 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
HDLBP-245ENST00000494862 DOCK2Q92608 1830 aa13.66□□□□□ -0.22
HDLBP-245ENST00000494862 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
HDLBP-245ENST00000494862 E7EWF7 191 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-245ENST00000494862 MBD4O95243 580 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 CYP7A1P22680 504 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 ALDH1B1P30837 517 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 TTLL5Q6EMB2 1281 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
HDLBP-245ENST00000494862 ZNF804AQ7Z570 1209 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 ABCF2Q9UG63 623 aa13.65□□□□□ -0.22
HDLBP-245ENST00000494862 ZNF213O14771 459 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 UFL1O94874 794 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 SPTY2D1Q68D10 685 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-245ENST00000494862 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
HDLBP-245ENST00000494862 MASTLQ96GX5 879 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 NSFL1CQ9UNZ2 370 aaKnown RBP13.64□□□□□ -0.23
HDLBP-245ENST00000494862 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-245ENST00000494862 SALL1Q9NSC2 1324 aa13.64□□□□□ -0.23
HDLBP-245ENST00000494862 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 APPP05067 770 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 EXOSC10Q01780 885 aaKnown RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 COL9A3Q14050 684 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 TOB2Q14106 344 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 WDR66Q8TBY9 1149 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 TNPO1Q92973 898 aaKnown RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
HDLBP-245ENST00000494862 ARMT1Q9H993 441 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 TPCN1Q9ULQ1 816 aa13.63□□□□□ -0.23
HDLBP-245ENST00000494862 QSER1Q2KHR3 1735 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 ANKRD31Q8N7Z5 1873 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 MAGEB6P1A0A0J9YX57 407 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 LARGE1O95461 756 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 ME3Q16798 604 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 STYK1Q6J9G0 422 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 Q6ZUG5 572 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 IFNL3Q8IZI9 196 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 LCORLQ8N3X6 602 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 TBC1D16Q8TBP0 767 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 NACAP1Q9BZK3 213 aa13.62□□□□□ -0.23
HDLBP-245ENST00000494862 MYO5AQ9Y4I1 1855 aaKnown RBP13.61□□□□□ -0.23
HDLBP-245ENST00000494862 GSG1L2A8MUP6 293 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 IL1R1P14778 569 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 MCM4P33991 863 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 HAND2P61296 217 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 MIGA1Q8NAN2 632 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
HDLBP-245ENST00000494862 GPR101Q96P66 508 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-245ENST00000494862 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 NAPBQ9H115 298 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-245ENST00000494862 CD209Q9NNX6 404 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 POLLQ9UGP5 575 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 SLC4A4Q9Y6R1 1079 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
HDLBP-245ENST00000494862 H0YIN7 160 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 MECOMQ03112 1051 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 CLEC17AQ6ZS10 378 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 ADGRA1Q86SQ6 560 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 CCDC83Q8IWF9 413 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-245ENST00000494862 NCOA7Q8NI08 942 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 ZNF384Q8TF68 577 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 RIOK1Q9BRS2 568 aaKnown RBP13.6□□□□□ -0.23
HDLBP-245ENST00000494862 TMX4Q9H1E5 349 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-245ENST00000494862 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
HDLBP-245ENST00000494862 PRKAB2O43741 272 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 MCM5P33992 734 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 FGD1P98174 961 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 TRDNQ13061 729 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 RALYLQ86SE5 291 aaKnown RBP13.59□□□□□ -0.23
HDLBP-245ENST00000494862 CCDC125Q86Z20 511 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 MPNDQ8N594 471 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDLBP-245ENST00000494862 NBPF3Q9H094 633 aa13.59□□□□□ -0.23
HDLBP-245ENST00000494862 CACNA1SQ13698 1873 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms