RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ADD2P35612 726 aa23.39■■□□□ 1.34
USP39-218ENST00000493829 C9orf131Q5VYM1 1079 aa23.39■■□□□ 1.34
USP39-218ENST00000493829 ZSCAN25Q6NSZ9 544 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 KIAA0825Q8IV33 1275 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 ZNF384Q8TF68 577 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 SEC62Q99442 399 aaKnown RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 IL25Q9H293 177 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 HIP1O00291 1037 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 EIF6P56537 245 aaKnown RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 DIXDC1Q155Q3 683 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 LRRFIP1Q32MZ4 808 aaKnown RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 CIAPIN1Q6FI81 312 aa23.38■■□□□ 1.33
USP39-218ENST00000493829 NAA16Q6N069 864 aaPredicted RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 NSUN4Q96CB9 384 aaKnown RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 ZBTB12Q9Y330 459 aaPredicted RBP23.38■■□□□ 1.33
USP39-218ENST00000493829 ZFYP08048 801 aaPredicted RBP23.37■■□□□ 1.33
USP39-218ENST00000493829 CYP7A1P22680 504 aa23.37■■□□□ 1.33
USP39-218ENST00000493829 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
USP39-218ENST00000493829 ADGRA1Q86SQ6 560 aa23.37■■□□□ 1.33
USP39-218ENST00000493829 TTF2Q9UNY4 1162 aaKnown RBP23.37■■□□□ 1.33
USP39-218ENST00000493829 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
USP39-218ENST00000493829 TCRBV5S4A2TA0A5A2 114 aa23.36■■□□□ 1.33
USP39-218ENST00000493829 M0R2C6 588 aa23.36■■□□□ 1.33
USP39-218ENST00000493829 FZD9O00144 591 aa23.36■■□□□ 1.33
USP39-218ENST00000493829 SCNN1DP51172 638 aa23.36■■□□□ 1.33
USP39-218ENST00000493829 RSBN1LQ6PCB5 846 aaPredicted RBP23.36■■□□□ 1.33
USP39-218ENST00000493829 MIGA1Q8NAN2 632 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 ESYT1Q9BSJ8 1104 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 MAST3O60307 1309 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 ZMYM1Q5SVZ6 1142 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 APPBP2Q92624 585 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 OSBP2Q969R2 916 aa23.35■■□□□ 1.33
USP39-218ENST00000493829 PUS7LQ9H0K6 701 aaKnown RBP23.35■■□□□ 1.33
USP39-218ENST00000493829 VIL1P09327 827 aaKnown RBP23.34■■□□□ 1.33
USP39-218ENST00000493829 TNIP1Q15025 636 aa23.34■■□□□ 1.33
USP39-218ENST00000493829 UBE3CQ15386 1083 aa23.34■■□□□ 1.33
USP39-218ENST00000493829 ZNF589Q86UQ0 364 aaPredicted RBP23.34■■□□□ 1.33
USP39-218ENST00000493829 MYH2Q9UKX2 1941 aa23.34■■□□□ 1.33
USP39-218ENST00000493829 SEC24BO95487 1268 aa23.33■■□□□ 1.33
USP39-218ENST00000493829 MFAP1P55081 439 aaKnown RBP23.33■■□□□ 1.33
USP39-218ENST00000493829 FKBP1AP62942 108 aaKnown RBP23.33■■□□□ 1.33
USP39-218ENST00000493829 RUFY2Q8WXA3 655 aa23.33■■□□□ 1.33
USP39-218ENST00000493829 MYO3BQ8WXR4 1341 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 SGSM2O43147 1006 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 MBD4O95243 580 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 GSTO1P78417 241 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 HELLSQ9NRZ9 838 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 SUGT1Q9Y2Z0 365 aa23.32■■□□□ 1.32
USP39-218ENST00000493829 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
USP39-218ENST00000493829 BACH2Q9BYV9 841 aa23.31■■□□□ 1.32
USP39-218ENST00000493829 ARMT1Q9H993 441 aa23.31■■□□□ 1.32
USP39-218ENST00000493829 AATFQ9NY61 560 aaKnown RBP eCLIP23.31■■□□□ 1.32
USP39-218ENST00000493829 GMPSP49915 693 aaPredicted RBP23.3■■□□□ 1.32
USP39-218ENST00000493829 DYNLL1P63167 89 aaKnown RBP23.3■■□□□ 1.32
USP39-218ENST00000493829 AIDAQ96BJ3 306 aa23.3■■□□□ 1.32
USP39-218ENST00000493829 ANO2Q9NQ90 1003 aa23.3■■□□□ 1.32
USP39-218ENST00000493829 RAD50Q92878 1312 aa23.3■■□□□ 1.32
USP39-218ENST00000493829 MAGEB6P1A0A0J9YX57 407 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 SHTN1A0MZ66 631 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 GPAA1O43292 621 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 RBM5P52756 815 aaKnown RBP eCLIP23.29■■□□□ 1.32
USP39-218ENST00000493829 CCDC171Q6TFL3 1326 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 LCORLQ8N3X6 602 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 GMLQ99445 158 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 PCDHAC2Q9Y5I4 1007 aa23.29■■□□□ 1.32
USP39-218ENST00000493829 DCAF8L1A6NGE4 600 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 CRKP46108 304 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 TICAM2Q86XR7 235 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 AGBL3Q8NEM8 1001 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 TEKT1Q969V4 418 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 DAGLAQ9Y4D2 1042 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 BTDP43251 543 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 SLF2Q8IX21 1173 aa23.28■■□□□ 1.32
USP39-218ENST00000493829 LDHCP07864 332 aa23.27■■□□□ 1.32
USP39-218ENST00000493829 NOL10Q9BSC4 688 aaKnown RBP23.27■■□□□ 1.32
USP39-218ENST00000493829 DDNO94850 711 aaPredicted RBP23.26■■□□□ 1.31
USP39-218ENST00000493829 USP17L8P0C7I0 530 aa23.26■■□□□ 1.31
USP39-218ENST00000493829 VPS53Q5VIR6 699 aa23.26■■□□□ 1.31
USP39-218ENST00000493829 GPC2Q8N158 579 aa23.26■■□□□ 1.31
USP39-218ENST00000493829 HDAC9Q9UKV0 1011 aa23.26■■□□□ 1.31
USP39-218ENST00000493829 GAKO14976 1311 aa23.26■■□□□ 1.31
USP39-218ENST00000493829 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
USP39-218ENST00000493829 OGFOD1Q8N543 542 aa23.25■■□□□ 1.31
USP39-218ENST00000493829 RIOK1Q9BRS2 568 aaKnown RBP23.25■■□□□ 1.31
USP39-218ENST00000493829 RPS12P25398 132 aaKnown RBP23.25■■□□□ 1.31
USP39-218ENST00000493829 CFAP100Q494V2 611 aa23.25■■□□□ 1.31
USP39-218ENST00000493829 MICALL2Q8IY33 904 aa23.25■■□□□ 1.31
USP39-218ENST00000493829 SH3RF3Q8TEJ3 882 aaPredicted RBP23.25■■□□□ 1.31
USP39-218ENST00000493829 PRKAB2O43741 272 aa23.24■■□□□ 1.31
USP39-218ENST00000493829 REC8O95072 547 aa23.24■■□□□ 1.31
USP39-218ENST00000493829 PTH1RQ03431 593 aa23.24■■□□□ 1.31
USP39-218ENST00000493829 STRBPQ96SI9 672 aaKnown RBP23.24■■□□□ 1.31
USP39-218ENST00000493829 SERPINA10Q9UK55 444 aa23.24■■□□□ 1.31
USP39-218ENST00000493829 IGSF3O75054 1194 aa23.23■■□□□ 1.31
USP39-218ENST00000493829 HHIPL2Q6UWX4 724 aa23.23■■□□□ 1.31
USP39-218ENST00000493829 LSG1Q9H089 658 aaKnown RBP23.23■■□□□ 1.31
USP39-218ENST00000493829 SLC4A4Q9Y6R1 1079 aa23.23■■□□□ 1.31
USP39-218ENST00000493829 GPR75-ASB3A0A0A6YYF3 556 aa23.22■■□□□ 1.31
USP39-218ENST00000493829 BAG3O95817 575 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms