RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ZNF280AP59817 542 aaPredicted RBP9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 GSTO1P78417 241 aa9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 SCARF1Q14162 830 aa9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 ANKRD45Q5TZF3 282 aa9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 EAF2Q96CJ1 260 aaPredicted RBP9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 RAI14Q9P0K7 980 aa9.92□□□□□ -0.82
TM4SF1-204ENST00000493348 ERC2O15083 957 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 SMARCA5O60264 1052 aaPredicted RBP9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 LDHCP07864 332 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 C1QTNF8P60827 252 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 RASGRF1Q13972 1273 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 TTF1Q15361 905 aaPredicted RBP9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 CFAP100Q494V2 611 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 TRPM4Q8TD43 1214 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 GMLQ99445 158 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 DBNLQ9UJU6 430 aaKnown RBP9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 ZNF646O15015 1829 aaPredicted RBP9.91□□□□□ -0.82
TM4SF1-204ENST00000493348 SALL1Q9NSC2 1324 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 TRPM7Q96QT4 1865 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 NF2P35240 595 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 MCAMP43121 646 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 CRKP46108 304 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 TNNI2P48788 182 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 HDLBPQ00341 1268 aaKnown RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 TNFAIP1Q13829 316 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 ANGEL2Q5VTE6 544 aaKnown RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 MAP1SQ66K74 1059 aaPredicted RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 B4GALNT3Q6L9W6 998 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 CDC37L1Q7L3B6 337 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 KRT26Q7Z3Y9 468 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 APOBEC3FQ8IUX4 373 aaKnown RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 CNTROBQ8N137 903 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 CERS5Q8N5B7 392 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 ZNF512BQ96KM6 892 aaPredicted RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 DNAJC2Q99543 621 aaKnown RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 VEZTQ9HBM0 779 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 TLR7Q9NYK1 1049 aaKnown RBP9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 GGA3Q9NZ52 723 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
TM4SF1-204ENST00000493348 IGSF3O75054 1194 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 MAP3K12Q12852 859 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 LRRFIP1Q32MZ4 808 aaKnown RBP9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 ZNF408Q9H9D4 720 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 ECHDC1Q9NTX5 307 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 AKAP11Q9UKA4 1901 aa9.89□□□□□ -0.83
TM4SF1-204ENST00000493348 PITPNM2Q9BZ72 1349 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 WNT10BO00744 389 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 IDH1O75874 414 aaKnown RBP9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 PRDX5P30044 214 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 ZAP70P43403 619 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 NBPF9Q3BBW0 867 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 NAA16Q6N069 864 aaPredicted RBP9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 HHIPL2Q6UWX4 724 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 USP48Q86UV5 1035 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 MRIQ9BWK5 157 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 BOLA2Q9H3K6 86 aa9.88□□□□□ -0.83
TM4SF1-204ENST00000493348 TTC41PQ6P2S7 1318 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 CLRN2A0PK11 232 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 SPDYE2BA6NHP3 402 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 GOLIM4O00461 696 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 BAG3O95817 575 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 SPDYE6P0CI01 402 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 ATP5JP18859 108 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 MX1P20591 662 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 APLP1P51693 650 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 HIRAP54198 1017 aaPredicted RBP9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 TTLL12Q14166 644 aaPredicted RBP9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 ZSCAN25Q6NSZ9 544 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 PI16Q6UXB8 463 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 PAG1Q9NWQ8 432 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 MAST2Q6P0Q8 1798 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 ADAMTSL1Q8N6G6 1762 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 MYH7P12883 1935 aa9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 MYO5AQ9Y4I1 1855 aaKnown RBP9.87□□□□□ -0.83
TM4SF1-204ENST00000493348 COL1A1P02452 1464 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 EGFRP00533 1210 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 CYP2E1P05181 493 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 PLCG2P16885 1265 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 MECOMQ03112 1051 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 TMED8Q6PL24 325 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 CERS3Q8IU89 383 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 C2orf69Q8N8R5 385 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 HOOK2Q96ED9 719 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 ZDHHC15Q96MV8 337 aa9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 GLIS2Q9BZE0 524 aaPredicted RBP9.86□□□□□ -0.83
TM4SF1-204ENST00000493348 LNPKQ9C0E8 428 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms