RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 COA1Q9GZY4 146 aa27.16■■□□□ 1.94
USF3-203ENST00000491165 MCCP23508 829 aa27.16■■□□□ 1.94
USF3-203ENST00000491165 NASPP49321 788 aaPredicted RBP27.16■■□□□ 1.94
USF3-203ENST00000491165 CHAF1AQ13111 956 aaPredicted RBP27.16■■□□□ 1.94
USF3-203ENST00000491165 DENND2AQ9ULE3 1009 aa27.16■■□□□ 1.94
USF3-203ENST00000491165 ZNF445P59923 1031 aa27.15■■□□□ 1.94
USF3-203ENST00000491165 ECE2O60344 883 aa27.14■■□□□ 1.94
USF3-203ENST00000491165 MCM2P49736 904 aa27.14■■□□□ 1.94
USF3-203ENST00000491165 NEK4P51957 841 aa27.14■■□□□ 1.94
USF3-203ENST00000491165 CCDC173Q0VFZ6 552 aa27.14■■□□□ 1.94
USF3-203ENST00000491165 YDJCA8MPS7 323 aa27.14■■□□□ 1.93
USF3-203ENST00000491165 KBTBD3Q8NAB2 608 aa27.14■■□□□ 1.93
USF3-203ENST00000491165 SBF1O95248 1867 aa27.14■■□□□ 1.93
USF3-203ENST00000491165 SEMA3EO15041 775 aa27.13■■□□□ 1.93
USF3-203ENST00000491165 FSD1Q9BTV5 496 aa27.13■■□□□ 1.93
USF3-203ENST00000491165 IARSP41252 1262 aaKnown RBP27.13■■□□□ 1.93
USF3-203ENST00000491165 GRIK5Q16478 980 aa27.13■■□□□ 1.93
USF3-203ENST00000491165 IL25Q9H293 177 aa27.13■■□□□ 1.93
USF3-203ENST00000491165 ZDHHC9Q9Y397 364 aa27.13■■□□□ 1.93
USF3-203ENST00000491165 NCLP19338 710 aaKnown RBP27.12■■□□□ 1.93
USF3-203ENST00000491165 CHMLP26374 656 aa27.12■■□□□ 1.93
USF3-203ENST00000491165 CAVIN1Q6NZI2 390 aaKnown RBP27.12■■□□□ 1.93
USF3-203ENST00000491165 LARGE2Q8N3Y3 721 aa27.12■■□□□ 1.93
USF3-203ENST00000491165 ANP32BQ92688 251 aaKnown RBP27.12■■□□□ 1.93
USF3-203ENST00000491165 ZBTB22O15209 634 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 ANAPC15P60006 121 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 LTBP3Q9NS15 1303 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 GTF2IP78347 998 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 ARHGAP27Q6ZUM4 889 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 TMX3Q96JJ7 454 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 ABCF2Q9UG63 623 aa27.11■■□□□ 1.93
USF3-203ENST00000491165 PDS5AQ29RF7 1337 aaKnown RBP27.11■■□□□ 1.93
USF3-203ENST00000491165 PSME4Q14997 1843 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 PRDX5P30044 214 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 ZSCAN23Q3MJ62 389 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 PODNQ7Z5L7 613 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 PPP1R9BQ96SB3 815 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 G3V3G9 751 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 DCAF8Q5TAQ9 597 aa27.1■■□□□ 1.93
USF3-203ENST00000491165 IDH1O75874 414 aaKnown RBP27.09■■□□□ 1.93
USF3-203ENST00000491165 ZNF384Q8TF68 577 aa27.09■■□□□ 1.93
USF3-203ENST00000491165 ANO2Q9NQ90 1003 aa27.09■■□□□ 1.93
USF3-203ENST00000491165 PRPF40AO75400 957 aaKnown RBP27.08■■□□□ 1.93
USF3-203ENST00000491165 TTLL5Q6EMB2 1281 aa27.08■■□□□ 1.93
USF3-203ENST00000491165 CERS5Q8N5B7 392 aa27.08■■□□□ 1.93
USF3-203ENST00000491165 FAM227BQ96M60 508 aa27.08■■□□□ 1.93
USF3-203ENST00000491165 FAM205AQ6ZU69 1335 aa27.07■■□□□ 1.92
USF3-203ENST00000491165 TTF1Q15361 905 aaPredicted RBP27.07■■□□□ 1.92
USF3-203ENST00000491165 FBXW7Q969H0 707 aa27.07■■□□□ 1.92
USF3-203ENST00000491165 NAP1L5Q96NT1 182 aaPredicted RBP27.07■■□□□ 1.92
USF3-203ENST00000491165 VPS33BQ9H267 617 aa27.07■■□□□ 1.92
USF3-203ENST00000491165 PALD1Q9ULE6 856 aa27.07■■□□□ 1.92
USF3-203ENST00000491165 DICER1Q9UPY3 1922 aaKnown RBP27.06■■□□□ 1.92
USF3-203ENST00000491165 CUL4AQ13619 759 aa27.06■■□□□ 1.92
USF3-203ENST00000491165 MFSD14BQ5SR56 506 aa27.06■■□□□ 1.92
USF3-203ENST00000491165 SEC62Q99442 399 aaKnown RBP27.06■■□□□ 1.92
USF3-203ENST00000491165 SALL1Q9NSC2 1324 aa27.06■■□□□ 1.92
USF3-203ENST00000491165 A0A0D9SFI3 127 aa27.05■■□□□ 1.92
USF3-203ENST00000491165 CWC27Q6UX04 472 aaKnown RBP27.05■■□□□ 1.92
USF3-203ENST00000491165 LRP2BPQ9P2M1 347 aa27.05■■□□□ 1.92
USF3-203ENST00000491165 WDR66Q8TBY9 1149 aa27.05■■□□□ 1.92
USF3-203ENST00000491165 IL17RAQ96F46 866 aa27.05■■□□□ 1.92
USF3-203ENST00000491165 NMIQ13287 307 aaPredicted RBP27.04■■□□□ 1.92
USF3-203ENST00000491165 SLC9C2Q5TAH2 1124 aa27.04■■□□□ 1.92
USF3-203ENST00000491165 GPT2Q8TD30 523 aa27.04■■□□□ 1.92
USF3-203ENST00000491165 RAD17O75943 681 aa27.04■■□□□ 1.92
USF3-203ENST00000491165 TCRBV5S4A2TA0A5A2 114 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 EPB41L2O43491 1005 aaKnown RBP27.03■■□□□ 1.92
USF3-203ENST00000491165 GPR162Q16538 588 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 DACT2Q5SW24 774 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 ADGRA1Q86SQ6 560 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 NIM1KQ8IY84 436 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 MAGEB6Q8N7X4 407 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 INTS4Q96HW7 963 aaKnown RBP27.03■■□□□ 1.92
USF3-203ENST00000491165 RFX7Q2KHR2 1363 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 MAST2Q6P0Q8 1798 aa27.03■■□□□ 1.92
USF3-203ENST00000491165 PDE6AP16499 860 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 ADD2P35612 726 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 RAI14Q9P0K7 980 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 ADAMTSL1Q8N6G6 1762 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 NSUN4Q96CB9 384 aaKnown RBP27.02■■□□□ 1.92
USF3-203ENST00000491165 DIAPH3Q9NSV4 1193 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 ZNRF3Q9ULT6 936 aa27.02■■□□□ 1.92
USF3-203ENST00000491165 ZNF532Q9HCE3 1301 aa27.01■■□□□ 1.92
USF3-203ENST00000491165 RNF113AO15541 343 aaKnown RBP27.01■■□□□ 1.91
USF3-203ENST00000491165 MECOMQ03112 1051 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 STRIP1Q5VSL9 837 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 OSBP2Q969R2 916 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 USP17L3A6NCW0 530 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 USP17L4A6NCW7 530 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 BRD1O95696 1058 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 MAP3K12Q12852 859 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 USP17L1Q7RTZ2 530 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 JDP2Q8WYK2 163 aa27.01■■□□□ 1.91
USF3-203ENST00000491165 PUS7LQ9H0K6 701 aaKnown RBP27.01■■□□□ 1.91
USF3-203ENST00000491165 MYH2Q9UKX2 1941 aa27■■□□□ 1.91
USF3-203ENST00000491165 PSMD14O00487 310 aa27■■□□□ 1.91
USF3-203ENST00000491165 ZNF589Q86UQ0 364 aaPredicted RBP27■■□□□ 1.91
USF3-203ENST00000491165 LMNB1P20700 586 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms