RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 WNT10BO00744 389 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 PRDX5P30044 214 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 ZBED3Q96IU2 234 aaPredicted RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
SSR1-210ENST00000489567 TTF2Q9UNY4 1162 aaKnown RBP9.66□□□□□ -0.86
SSR1-210ENST00000489567 SEMA3EO15041 775 aa9.65□□□□□ -0.86
SSR1-210ENST00000489567 WDR66Q8TBY9 1149 aa9.65□□□□□ -0.86
SSR1-210ENST00000489567 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
SSR1-210ENST00000489567 GLIS2Q9BZE0 524 aaPredicted RBP9.65□□□□□ -0.86
SSR1-210ENST00000489567 SNRKQ9NRH2 765 aa9.65□□□□□ -0.86
SSR1-210ENST00000489567 MYH13Q9UKX3 1938 aa9.65□□□□□ -0.87
SSR1-210ENST00000489567 TRAF5O00463 557 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 IGHDP01880 384 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
SSR1-210ENST00000489567 CFAP100Q494V2 611 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 TTC39AQ5SRH9 613 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 ANGEL2Q5VTE6 544 aaKnown RBP9.64□□□□□ -0.87
SSR1-210ENST00000489567 TBC1D9Q6ZT07 1266 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
SSR1-210ENST00000489567 SPATA5Q8NB90 893 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
SSR1-210ENST00000489567 PRMT6Q96LA8 375 aaPredicted RBP9.64□□□□□ -0.87
SSR1-210ENST00000489567 LRRCC1Q9C099 1032 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 GGA3Q9NZ52 723 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 HDAC9Q9UKV0 1011 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 NDUFB9Q9Y6M9 179 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 PASKQ96RG2 1323 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 SALL1Q9NSC2 1324 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 AAMPQ13685 434 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 CCDC158Q5M9N0 1113 aa9.64□□□□□ -0.87
SSR1-210ENST00000489567 PDS5AQ29RF7 1337 aaKnown RBP9.63□□□□□ -0.87
SSR1-210ENST00000489567 AKAP11Q9UKA4 1901 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 ADM5C9JUS6 153 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 IFIT2P09913 472 aaKnown RBP9.63□□□□□ -0.87
SSR1-210ENST00000489567 UQCRFS1P1P0C7P4 283 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 ZAP70P43403 619 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 CRKP46108 304 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 RBM5P52756 815 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSR1-210ENST00000489567 HTRA3P83110 453 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 USP48Q86UV5 1035 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 MTMR14Q8NCE2 650 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 ZNF384Q8TF68 577 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 ZNF512BQ96KM6 892 aaPredicted RBP9.63□□□□□ -0.87
SSR1-210ENST00000489567 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 SUGT1Q9Y2Z0 365 aa9.63□□□□□ -0.87
SSR1-210ENST00000489567 CLRN2A0PK11 232 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 MMP14P50281 582 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 KRT26Q7Z3Y9 468 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 OTUD7AQ8TE49 926 aaPredicted RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 DCPSQ96C86 337 aaKnown RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 HSPA6P17066 643 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 TSHZ3Q63HK5 1081 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 APOBEC3HQ6NTF7 200 aaKnown RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 CDC37L1Q7L3B6 337 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 TEKT1Q969V4 418 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 ANTXR1Q9H6X2 564 aa9.62□□□□□ -0.87
SSR1-210ENST00000489567 TDRD3Q9H7E2 651 aaKnown RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 PIH1D3Q9NQM4 214 aaKnown RBP9.62□□□□□ -0.87
SSR1-210ENST00000489567 POLR2AP24928 1970 aaKnown RBP9.61□□□□□ -0.87
SSR1-210ENST00000489567 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
SSR1-210ENST00000489567 MECOMQ03112 1051 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 PRAMEF18Q5VWM3 479 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 CST9Q5W186 159 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 EDC3Q96F86 508 aaKnown RBP9.61□□□□□ -0.87
SSR1-210ENST00000489567 ZDHHC15Q96MV8 337 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 MRIQ9BWK5 157 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
SSR1-210ENST00000489567 APLP1P51693 650 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 CACNB3P54284 484 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 HHIPL2Q6UWX4 724 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 SULF1Q8IWU6 871 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 SMC5Q8IY18 1101 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 ZGPATQ8N5A5 531 aaKnown RBP9.6□□□□□ -0.87
SSR1-210ENST00000489567 GCC1Q96CN9 775 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 RWDD1Q9H446 243 aaPredicted RBP9.6□□□□□ -0.87
SSR1-210ENST00000489567 MAST3O60307 1309 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 PITPNM2Q9BZ72 1349 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 CEP350Q5VT06 3117 aa9.6□□□□□ -0.87
SSR1-210ENST00000489567 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 B4GALNT3Q6L9W6 998 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 DZIP1Q86YF9 867 aaKnown RBP9.59□□□□□ -0.87
SSR1-210ENST00000489567 NSUN4Q96CB9 384 aaKnown RBP9.59□□□□□ -0.87
SSR1-210ENST00000489567 BOLA2Q9H3K6 86 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 VEZTQ9HBM0 779 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 ZNF70Q9UC06 446 aaPredicted RBP9.59□□□□□ -0.87
SSR1-210ENST00000489567 MYO5AQ9Y4I1 1855 aaKnown RBP9.59□□□□□ -0.87
SSR1-210ENST00000489567 ATP5JP18859 108 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 SPTY2D1Q68D10 685 aaPredicted RBP9.59□□□□□ -0.87
SSR1-210ENST00000489567 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 DNAJC2Q99543 621 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms