RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 PDCP20941 246 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
RPL13A-212ENST00000488946 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 PROM2Q8N271 834 aa16.7■□□□□ 0.26
RPL13A-212ENST00000488946 ZBTB22O15209 634 aa16.69■□□□□ 0.26
RPL13A-212ENST00000488946 GPAA1O43292 621 aa16.69■□□□□ 0.26
RPL13A-212ENST00000488946 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
RPL13A-212ENST00000488946 HELBQ8NG08 1087 aaPredicted RBP16.69■□□□□ 0.26
RPL13A-212ENST00000488946 SYAP1Q96A49 352 aaPredicted RBP16.69■□□□□ 0.26
RPL13A-212ENST00000488946 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
RPL13A-212ENST00000488946 PFKFB2O60825 505 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 RPS6KA4O75676 772 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 HMGB2P26583 209 aaKnown RBP16.68■□□□□ 0.26
RPL13A-212ENST00000488946 TTLL5Q6EMB2 1281 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 BRF1Q92994 677 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 TCRBV5S4A2TA0A5A2 114 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 USP48Q86UV5 1035 aa16.68■□□□□ 0.26
RPL13A-212ENST00000488946 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
RPL13A-212ENST00000488946 CCNL1Q9UK58 526 aaPredicted RBP16.68■□□□□ 0.26
RPL13A-212ENST00000488946 PDE6AP16499 860 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
RPL13A-212ENST00000488946 DNTTIP2Q5QJE6 756 aaKnown RBP16.67■□□□□ 0.26
RPL13A-212ENST00000488946 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 CGNQ9P2M7 1197 aaKnown RBP16.67■□□□□ 0.26
RPL13A-212ENST00000488946 FGAP02671 866 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 KCNQ4P56696 695 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 RASGRF1Q13972 1273 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
RPL13A-212ENST00000488946 SMARCC2Q8TAQ2 1214 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
RPL13A-212ENST00000488946 CNPY2Q9Y2B0 182 aa16.67■□□□□ 0.26
RPL13A-212ENST00000488946 TIAM2Q8IVF5 1701 aa16.66■□□□□ 0.26
RPL13A-212ENST00000488946 PTMAP06454 111 aaKnown RBP16.66■□□□□ 0.26
RPL13A-212ENST00000488946 EVCP57679 992 aa16.66■□□□□ 0.26
RPL13A-212ENST00000488946 CHRNDQ07001 517 aa16.66■□□□□ 0.26
RPL13A-212ENST00000488946 STK3Q13188 491 aa16.66■□□□□ 0.26
RPL13A-212ENST00000488946 ZNF710Q8N1W2 664 aa16.66■□□□□ 0.26
RPL13A-212ENST00000488946 VPS37CA5D8V6 355 aaPredicted RBP16.65■□□□□ 0.26
RPL13A-212ENST00000488946 PHF14O94880 888 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 GDPD2Q9HCC8 539 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.263e-21■■□□□ 11.7
RPL13A-212ENST00000488946 ZMYM6O95789 1325 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 TAF1P21675 1872 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
RPL13A-212ENST00000488946 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 SCRN1Q12765 414 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
RPL13A-212ENST00000488946 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
RPL13A-212ENST00000488946 DTNBO60941 627 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
RPL13A-212ENST00000488946 FOXD4L6Q3SYB3 417 aaPredicted RBP16.64■□□□□ 0.25
RPL13A-212ENST00000488946 FOXD4L3Q6VB84 417 aaPredicted RBP16.64■□□□□ 0.25
RPL13A-212ENST00000488946 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 ZNF804BA4D1E1 1349 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 SNAP23O00161 211 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 BRD2P25440 801 aaKnown RBP16.64■□□□□ 0.25
RPL13A-212ENST00000488946 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
RPL13A-212ENST00000488946 MYH15Q9Y2K3 1946 aa16.64■□□□□ 0.25
RPL13A-212ENST00000488946 GNPATO15228 680 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 JAK2O60674 1132 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 APOBRQ0VD83 1088 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
RPL13A-212ENST00000488946 BSDC1Q9NW68 430 aaPredicted RBP16.63■□□□□ 0.25
RPL13A-212ENST00000488946 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 UBE2HP62256 183 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
RPL13A-212ENST00000488946 ALX1Q15699 326 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
RPL13A-212ENST00000488946 NSUN7Q8NE18 718 aaKnown RBP16.63■□□□□ 0.25
RPL13A-212ENST00000488946 CHD4Q14839 1912 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
RPL13A-212ENST00000488946 HAND2P61296 217 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
RPL13A-212ENST00000488946 MAP3K12Q12852 859 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 UVSSAQ2YD98 709 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 STRBPQ96SI9 672 aaKnown RBP16.62■□□□□ 0.25
RPL13A-212ENST00000488946 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 SRP68Q9UHB9 627 aaKnown RBP16.62■□□□□ 0.25
RPL13A-212ENST00000488946 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 CHMP4CQ96CF2 233 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
RPL13A-212ENST00000488946 ZNF213O14771 459 aa16.61■□□□□ 0.25
RPL13A-212ENST00000488946 CTDNEP1O95476 244 aa16.61■□□□□ 0.25
RPL13A-212ENST00000488946 BCAMP50895 628 aa16.61■□□□□ 0.25
RPL13A-212ENST00000488946 HMGN5P82970 282 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms