RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 MCOLN1Q9GZU1 580 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 TMEM134Q9H6X4 195 aa3.57□□□□□ -1.84
DEPDC1-203ENST00000488146 CASP8AP2Q9UKL3 1982 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF236Q9UL36 1845 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 HOXA2O43364 376 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 C21orf2O43822 256 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 FDX1P10109 184 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 PTPN5P54829 565 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 PODNQ7Z5L7 613 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 HELBQ8NG08 1087 aaPredicted RBP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 GPR101Q96P66 508 aaPredicted RBP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 GMLQ99445 158 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 GINM1Q9NU53 330 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 HYPKQ9NX55 129 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 MYPNQ86TC9 1320 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 C6orf229H3BNL8 230 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 LBX1P52954 281 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 MFAP1P55081 439 aaKnown RBP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 FUT2Q10981 343 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 TCIRG1Q13488 830 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 CCDC27Q2M243 656 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 TMEM259Q4ZIN3 620 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 SWT1Q5T5J6 900 aaKnown RBP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 LDLRAD1Q5T700 205 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 TMCO4Q5TGY1 634 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 RASAL3Q86YV0 1011 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 PLBD2Q8NHP8 589 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 NKX2-3Q8TAU0 364 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 ZNF622Q969S3 477 aaKnown RBP eCLIP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 UCN2Q96RP3 112 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 PLEKHF1Q96S99 279 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 TRAIPQ9BWF2 469 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 GBA2Q9HCG7 927 aaPredicted RBP3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 KIAA1468Q9P260 1216 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 LEMD3Q9Y2U8 911 aa3.56□□□□□ -1.84
DEPDC1-203ENST00000488146 DDX60LQ5H9U9 1706 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 ABCC4O15439 1325 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 PDS5AQ29RF7 1337 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 SH3TC1Q8TE82 1336 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 GOLGA8CPA6NN73 597 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 DDNO94850 711 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 DNAJB2P25686 324 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 SCNN1AP37088 669 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NEUROD1Q13562 356 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NR6A1Q15406 480 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 CST9Q5W186 159 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 OTUD7BQ6GQQ9 843 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 PPARGC1BQ86YN6 1023 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 BANK1Q8NDB2 785 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 ZBED2Q9BTP6 218 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 LGR6Q9HBX8 967 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NIP7Q9Y221 180 aaKnown RBP eCLIP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 LOC285556D6RIA3 1793 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 TRIM6-TRIM34B2RNG4 842 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NBPF26B4DH59 902 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NF2P35240 595 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 KCNQ4P56696 695 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 FAM109BQ6ICB4 259 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 NBPF10Q6P3W6 841 aaKnown RBP3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 ANKRD23Q86SG2 305 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 SULF1Q8IWU6 871 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 LARGE2Q8N3Y3 721 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 MPNDQ8N594 471 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 ANKLE1Q8NAG6 615 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 CCDC191Q8NCU4 936 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 PRR7Q8TB68 274 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 ANKRD2Q9GZV1 360 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 COA1Q9GZY4 146 aa3.55□□□□□ -1.84
DEPDC1-203ENST00000488146 MAST2Q6P0Q8 1798 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 TMEM265A0A087WTH1 108 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 PALM3A6NDB9 673 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 BHMG1C9JSJ3 638 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 FKTNO75072 461 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 BMP8BP34820 402 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 THSD4Q6ZMP0 1018 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 DDX46Q7L014 1031 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 ARMC9Q7Z3E5 817 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 TRMT44Q8IYL2 757 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 MRPL50Q8N5N7 158 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 DCPSQ96C86 337 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 TFIP11Q9UBB9 837 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 OTOFQ9HC10 1997 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 PIK3CDO00329 1044 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 CHL1O00533 1208 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 PTCD1O75127 700 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 STRIP1Q5VSL9 837 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 DPP8Q6V1X1 898 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 NLRP10Q86W26 655 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 RGS22Q8NE09 1264 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 GTF3C2Q8WUA4 911 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 RNF186Q9NXI6 227 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 RBM27Q9P2N5 1060 aaKnown RBP3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 XDHP47989 1333 aa3.54□□□□□ -1.84
DEPDC1-203ENST00000488146 PPP1R3GB7ZBB8 358 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 PPIP5K2O43314 1243 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 PPP2R1AP30153 589 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 GMPSP49915 693 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 CXCL9Q07325 125 aa3.53□□□□□ -1.84
DEPDC1-203ENST00000488146 NOL9Q5SY16 702 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms