RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ME3Q16798 604 aa16.69■□□□□ 0.26
CLK3-204ENST00000483723 LARP6Q9BRS8 491 aaKnown RBP16.69■□□□□ 0.26
CLK3-204ENST00000483723 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
CLK3-204ENST00000483723 MBD4O95243 580 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 CYP7A1P22680 504 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 BAG6P46379 1132 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
CLK3-204ENST00000483723 ZDHHC9Q9Y397 364 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 ATP6V0A2Q9Y487 856 aa16.68■□□□□ 0.26
CLK3-204ENST00000483723 GSG1L2A8MUP6 293 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ZNF213O14771 459 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 MCM4P33991 863 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 IFNL3Q8IZI9 196 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 TCEANC2Q96MN5 208 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
CLK3-204ENST00000483723 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
CLK3-204ENST00000483723 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
CLK3-204ENST00000483723 Q6ZUG5 572 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 ADGRA1Q86SQ6 560 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 NSUN4Q96CB9 384 aaKnown RBP16.67■□□□□ 0.26
CLK3-204ENST00000483723 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
CLK3-204ENST00000483723 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 UFL1O94874 794 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 IL1R1P14778 569 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
CLK3-204ENST00000483723 WDR66Q8TBY9 1149 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
CLK3-204ENST00000483723 EPB41L4AQ9HCS5 686 aaPredicted RBP16.66■□□□□ 0.26
CLK3-204ENST00000483723 POLLQ9UGP5 575 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 MAST2Q6P0Q8 1798 aa16.66■□□□□ 0.26
CLK3-204ENST00000483723 PKP1Q13835 747 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 SPTY2D1Q68D10 685 aaPredicted RBP16.65■□□□□ 0.26
CLK3-204ENST00000483723 MB21D2Q8IYB1 491 aaPredicted RBP16.65■□□□□ 0.26
CLK3-204ENST00000483723 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 MAGEB6P1A0A0J9YX57 407 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 BRD1O95696 1058 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 APPP05067 770 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 EVCP57679 992 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 HAND2P61296 217 aa16.65■□□□□ 0.26
CLK3-204ENST00000483723 PRKAB2O43741 272 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 MECOMQ03112 1051 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
CLK3-204ENST00000483723 STYK1Q6J9G0 422 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 DEFB132Q7Z7B7 95 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 CCDC83Q8IWF9 413 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
CLK3-204ENST00000483723 MIGA1Q8NAN2 632 aa16.63■□□□□ 0.25
CLK3-204ENST00000483723 GPR101Q96P66 508 aaPredicted RBP16.63■□□□□ 0.25
CLK3-204ENST00000483723 GBP4Q96PP9 640 aa16.63■□□□□ 0.25
CLK3-204ENST00000483723 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
CLK3-204ENST00000483723 NAPBQ9H115 298 aa16.63■□□□□ 0.25
CLK3-204ENST00000483723 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 PRDX5P30044 214 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 SMC3Q9UQE7 1217 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 DUOX1Q9NRD9 1551 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 MCM5P33992 734 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 ANTXR2P58335 489 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 C2CD5Q86YS7 1000 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 BRF1Q92994 677 aa16.62■□□□□ 0.25
CLK3-204ENST00000483723 CHD4Q14839 1912 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 PFKFB2O60825 505 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
CLK3-204ENST00000483723 MPNDQ8N594 471 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 ZNF274Q96GC6 653 aaPredicted RBP16.61■□□□□ 0.25
CLK3-204ENST00000483723 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 ANAPC4Q9UJX5 808 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 FAM205AQ6ZU69 1335 aa16.61■□□□□ 0.25
CLK3-204ENST00000483723 DDX11L8A8MPP1 907 aa16.6■□□□□ 0.25
CLK3-204ENST00000483723 H0YIN7 160 aa16.6■□□□□ 0.25
CLK3-204ENST00000483723 C6orf229H3BNL8 230 aa16.6■□□□□ 0.25
CLK3-204ENST00000483723 PDIA4P13667 645 aaKnown RBP16.6■□□□□ 0.25
CLK3-204ENST00000483723 DYNLL1P63167 89 aaKnown RBP16.6■□□□□ 0.25
CLK3-204ENST00000483723 SLC16A10Q8TF71 515 aa16.6■□□□□ 0.25
CLK3-204ENST00000483723 PRC1O43663 620 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 LDHBP07195 334 aaKnown RBP16.59■□□□□ 0.25
CLK3-204ENST00000483723 GJB2P29033 226 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 TRDNQ13061 729 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
CLK3-204ENST00000483723 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 SYT1P21579 422 aa16.59■□□□□ 0.25
CLK3-204ENST00000483723 PPP4CP60510 307 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms