RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 OTOFQ9HC10 1997 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
CHD6-209ENST00000482596 NUP98P52948 1817 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 LRRC37AA6NMS7 1700 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 GNRH1P01148 92 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 TTC5Q8N0Z6 440 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 IL27Q8NEV9 243 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 MYPNQ86TC9 1320 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 PSME4Q14997 1843 aa8.98□□□□□ -0.97
CHD6-209ENST00000482596 BMP1P13497 986 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 PSMC4P43686 418 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 FBXL18Q96ME1 805 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 PUS7Q96PZ0 661 aaKnown RBP8.97□□□□□ -0.97
CHD6-209ENST00000482596 TEX13AQ9BXU3 409 aaPredicted RBP8.97□□□□□ -0.97
CHD6-209ENST00000482596 NYXQ9GZU5 481 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 LHX6Q9UPM6 363 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 ATRXP46100 2492 aa8.97□□□□□ -0.97
CHD6-209ENST00000482596 TLR2O60603 784 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 PRKCZQ05513 592 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 MAP3K11Q16584 847 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 ZNF687Q8N1G0 1237 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 GMLQ99445 158 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 PAK6Q9NQU5 681 aaPredicted RBP8.96□□□□□ -0.98
CHD6-209ENST00000482596 USP16Q9Y5T5 823 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 MGAMO43451 1857 aa8.96□□□□□ -0.98
CHD6-209ENST00000482596 COL3A1P02461 1466 aaPredicted RBP8.96□□□□□ -0.98
CHD6-209ENST00000482596 INHAP05111 366 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 USP17L8P0C7I0 530 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 ELNP15502 786 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 KCTD2Q14681 263 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 SHHQ15465 462 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 CCDC85BQ15834 202 aaPredicted RBP8.95□□□□□ -0.98
CHD6-209ENST00000482596 C9orf50Q5SZB4 431 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 RSBN1LQ6PCB5 846 aaPredicted RBP8.95□□□□□ -0.98
CHD6-209ENST00000482596 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 GABRQQ9UN88 632 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 PFASO15067 1338 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 UBN2Q6ZU65 1347 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 CFAP47Q6ZTR5 3102 aa8.95□□□□□ -0.98
CHD6-209ENST00000482596 LTBP2Q14767 1821 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 CHD6Q8TD26 2715 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 CCL15-CCL14A0A0B4J2E2 113 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 WNT10BO00744 389 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 BBOX1O75936 387 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 SASH1O94885 1247 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 FMNL1O95466 1100 aaPredicted RBP8.94□□□□□ -0.98
CHD6-209ENST00000482596 GPTP24298 496 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 KCNQ1P51787 676 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 TFF2Q03403 129 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 CCL15Q16663 113 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 SUSD4Q5VX71 490 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 ZNF790Q6PG37 636 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 AGBL3Q8NEM8 1001 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 OPTNQ96CV9 577 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 NBPF3Q9H094 633 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 C11orf49Q9H6J7 331 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 SIPA1L3O60292 1781 aaPredicted RBP8.94□□□□□ -0.98
CHD6-209ENST00000482596 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
CHD6-209ENST00000482596 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 SETXQ7Z333 2677 aaKnown RBP8.93□□□□□ -0.98
CHD6-209ENST00000482596 CHD9Q3L8U1 2897 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 SMAD3P84022 425 aaKnown RBP8.93□□□□□ -0.98
CHD6-209ENST00000482596 NBPF10Q6P3W6 841 aaKnown RBP8.93□□□□□ -0.98
CHD6-209ENST00000482596 ELP3Q9H9T3 547 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 CPA4Q9UI42 421 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 ADGRA2Q96PE1 1338 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 COL4A1P02462 1669 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 UNC79Q9P2D8 2635 aa8.93□□□□□ -0.98
CHD6-209ENST00000482596 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 KCNQ3O43525 872 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 ADCY3O60266 1144 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 NTSR2O95665 410 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 HOXD10P28358 340 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 PDE3AQ14432 1141 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 SULT6B1Q6IMI4 303 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 C17orf99Q6UX52 265 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
CHD6-209ENST00000482596 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 NLRP3Q96P20 1036 aa8.92□□□□□ -0.98
CHD6-209ENST00000482596 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
CHD6-209ENST00000482596 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
CHD6-209ENST00000482596 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
CHD6-209ENST00000482596 LRRC26Q2I0M4 334 aa8.91□□□□□ -0.98
CHD6-209ENST00000482596 SPNS2Q8IVW8 549 aa8.91□□□□□ -0.98
CHD6-209ENST00000482596 ANKLE1Q8NAG6 615 aa8.91□□□□□ -0.98
CHD6-209ENST00000482596 NECTIN2Q92692 538 aa8.91□□□□□ -0.98
CHD6-209ENST00000482596 ZFHX2Q9C0A1 2572 aaPredicted RBP8.91□□□□□ -0.98
CHD6-209ENST00000482596 IBTKQ9P2D0 1353 aaPredicted RBP8.9□□□□□ -0.98
CHD6-209ENST00000482596 PRR33A8MZF0 331 aa8.9□□□□□ -0.98
CHD6-209ENST00000482596 TULP1O00294 542 aaPredicted RBP8.9□□□□□ -0.98
CHD6-209ENST00000482596 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
CHD6-209ENST00000482596 USP2O75604 605 aaPredicted RBP8.9□□□□□ -0.98
CHD6-209ENST00000482596 CAPN2P17655 700 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms