RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 HOOK2Q96ED9 719 aa6.22□□□□□ -1.41
HDAC6-223ENST00000480525 CRBNQ96SW2 442 aa6.22□□□□□ -1.41
HDAC6-223ENST00000480525 C1orf115Q9H7X2 142 aa6.22□□□□□ -1.41
HDAC6-223ENST00000480525 RRAGCQ9HB90 399 aa6.22□□□□□ -1.41
HDAC6-223ENST00000480525 EXOC6BQ9Y2D4 811 aa6.22□□□□□ -1.41
HDAC6-223ENST00000480525 ATRNL1Q5VV63 1379 aa6.21□□□□□ -1.41
HDAC6-223ENST00000480525 GPR75-ASB3A0A0A6YYF3 556 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-223ENST00000480525 SNAP23O00161 211 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 ERC2O15083 957 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 GLRX3O76003 335 aaKnown RBP6.21□□□□□ -1.42
HDAC6-223ENST00000480525 LDHBP07195 334 aaKnown RBP6.21□□□□□ -1.42
HDAC6-223ENST00000480525 ZFYP08048 801 aaPredicted RBP6.21□□□□□ -1.42
HDAC6-223ENST00000480525 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.42
HDAC6-223ENST00000480525 PLCG2P16885 1265 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 EPS15P42566 896 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 MCAMP43121 646 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 NT5C2P49902 561 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 C1QTNF8P60827 252 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 SPDYE2Q495Y8 402 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 GORABQ5T7V8 394 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 HAUS7Q99871 368 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 IDI2Q9BXS1 227 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 ECHDC1Q9NTX5 307 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 HMG20BQ9P0W2 317 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 GJA3Q9Y6H8 435 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 MYH1P12882 1939 aa6.21□□□□□ -1.42
HDAC6-223ENST00000480525 ENTPD3O75355 529 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 FRAT2O75474 233 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 ADORA1P30542 326 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 TNNI2P48788 182 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 APLP1P51693 650 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 NUCB1Q02818 461 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 MAP3K12Q12852 859 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 DLGAP5Q15398 846 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 TTC39AQ5SRH9 613 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 ERICH6Q7L0X2 663 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 AACSQ86V21 672 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 REM2Q8IYK8 340 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 DCPSQ96C86 337 aaKnown RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 NSUN4Q96CB9 384 aaKnown RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 NEUROD6Q96NK8 337 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 GPR101Q96P66 508 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 DBNDD2Q9BQY9 259 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 KCNQ5Q9NR82 932 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 CREBZFQ9NS37 354 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 TTF2Q9UNY4 1162 aaKnown RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 ZBTB12Q9Y330 459 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-223ENST00000480525 MROH7-TTC4A0A0A0MT08 1334 aa6.2□□□□□ -1.42
HDAC6-223ENST00000480525 MYH8P13535 1937 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 CYP2E1P05181 493 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-223ENST00000480525 HSPA6P17066 643 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 MX1P20591 662 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 CRKP46108 304 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 CFAP100Q494V2 611 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 ZSCAN25Q6NSZ9 544 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 APOBEC3HQ6NTF7 200 aaKnown RBP6.19□□□□□ -1.42
HDAC6-223ENST00000480525 CENPQQ7L2Z9 268 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-223ENST00000480525 METTL16Q86W50 562 aaKnown RBP6.19□□□□□ -1.42
HDAC6-223ENST00000480525 KIAA0825Q8IV33 1275 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 CNTROBQ8N137 903 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 TRPM4Q8TD43 1214 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.19□□□□□ -1.424e-7■■■■■ 29.1
HDAC6-223ENST00000480525 GINM1Q9NU53 330 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 ZBTB47Q9UFB7 747 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-223ENST00000480525 NAV1Q8NEY1 1877 aa6.19□□□□□ -1.42
HDAC6-223ENST00000480525 RASSF10A6NK89 507 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 TBC1D12O60347 775 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 BAG3O95817 575 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 PRDX5P30044 214 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 MECOMQ03112 1051 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 SCARF1Q14162 830 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 CHD1LQ86WJ1 897 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 DZIP1Q86YF9 867 aaKnown RBP6.18□□□□□ -1.42
HDAC6-223ENST00000480525 KBTBD3Q8NAB2 608 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 EXOC6Q8TAG9 804 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 FAM151AQ8WW52 585 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 DHX36Q9H2U1 1008 aaKnown RBP6.18□□□□□ -1.42
HDAC6-223ENST00000480525 GGA3Q9NZ52 723 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 TMOD2Q9NZR1 351 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 DAGLAQ9Y4D2 1042 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 PTPRFP10586 1907 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 ZMYM6O95789 1325 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 SIPA1L1O43166 1804 aa6.18□□□□□ -1.42
HDAC6-223ENST00000480525 DOCK1Q14185 1865 aa6.17□□□□□ -1.42
HDAC6-223ENST00000480525 TMEM88BA6NKF7 163 aa6.17□□□□□ -1.42
HDAC6-223ENST00000480525 HIP1O00291 1037 aa6.17□□□□□ -1.42
HDAC6-223ENST00000480525 EGFRP00533 1210 aa6.17□□□□□ -1.42
HDAC6-223ENST00000480525 NEFLP07196 543 aa6.17□□□□□ -1.42
HDAC6-223ENST00000480525 NF2P35240 595 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms