RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 CNTROBQ8N137 903 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 TBC1D22AQ8WUA7 517 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 DENND2AQ9ULE3 1009 aa12.62□□□□□ -0.39
HDAC6-222ENST00000478095 TRAF5O00463 557 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 SEMA3EO15041 775 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 SMARCA5O60264 1052 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-222ENST00000478095 RAB11FIP3O75154 756 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 PRDX5P30044 214 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 CLCN6P51797 869 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
HDAC6-222ENST00000478095 CFAP100Q494V2 611 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 CCDC158Q5M9N0 1113 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
HDAC6-222ENST00000478095 WDR66Q8TBY9 1149 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-222ENST00000478095 HMG20BQ9P0W2 317 aa12.61□□□□□ -0.39
HDAC6-222ENST00000478095 SCAF8Q9UPN6 1271 aaKnown RBP12.61□□□□□ -0.39
HDAC6-222ENST00000478095 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 WNT10BO00744 389 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ITGBL1O95965 494 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ARID4AP29374 1257 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-222ENST00000478095 MCAMP43121 646 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ANGEL2Q5VTE6 544 aaKnown RBP12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
HDAC6-222ENST00000478095 LRRCC1Q9C099 1032 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ABCF2Q9UG63 623 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 PGAP2Q9UHJ9 254 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 AOX1Q06278 1338 aa12.6□□□□□ -0.39
HDAC6-222ENST00000478095 GABBR2O75899 941 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
HDAC6-222ENST00000478095 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 HSPA6P17066 643 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 CRKP46108 304 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 HTRA3P83110 453 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 SPATA5Q8NB90 893 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 DCPSQ96C86 337 aaKnown RBP12.59□□□□□ -0.39
HDAC6-222ENST00000478095 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-222ENST00000478095 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
HDAC6-222ENST00000478095 CLRN2A0PK11 232 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
HDAC6-222ENST00000478095 DIXDC1Q155Q3 683 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 CDC37L1Q7L3B6 337 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 ARAP2Q8WZ64 1704 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 ZBED3Q96IU2 234 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-222ENST00000478095 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 NDUFB9Q9Y6M9 179 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 SALL1Q9NSC2 1324 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 PSME4Q14997 1843 aa12.58□□□□□ -0.4
HDAC6-222ENST00000478095 ZAP70P43403 619 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 MMP14P50281 582 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 APLP1P51693 650 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 HDAC1Q13547 482 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-222ENST00000478095 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 TEKT1Q969V4 418 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 PRMT6Q96LA8 375 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-222ENST00000478095 ZNF408Q9H9D4 720 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 MAST3O60307 1309 aa12.57□□□□□ -0.4
HDAC6-222ENST00000478095 PDS5AQ29RF7 1337 aaKnown RBP12.57□□□□□ -0.4
HDAC6-222ENST00000478095 AAMPQ13685 434 aa12.56□□□□□ -0.4
HDAC6-222ENST00000478095 DZIP1Q86YF9 867 aaKnown RBP12.56□□□□□ -0.4
HDAC6-222ENST00000478095 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
HDAC6-222ENST00000478095 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
HDAC6-222ENST00000478095 TDRD3Q9H7E2 651 aaKnown RBP12.56□□□□□ -0.4
HDAC6-222ENST00000478095 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
HDAC6-222ENST00000478095 MYO1BO43795 1136 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
HDAC6-222ENST00000478095 IGHDP01880 384 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 CYP2E1P05181 493 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-222ENST00000478095 NUBP1P53384 320 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 PRAMEF18Q5VWM3 479 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-222ENST00000478095 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
HDAC6-222ENST00000478095 RAI14Q9P0K7 980 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 DAGLAQ9Y4D2 1042 aa12.55□□□□□ -0.4
HDAC6-222ENST00000478095 CACNB3P54284 484 aa12.54□□□□□ -0.4
HDAC6-222ENST00000478095 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
HDAC6-222ENST00000478095 MECOMQ03112 1051 aa12.54□□□□□ -0.4
HDAC6-222ENST00000478095 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
HDAC6-222ENST00000478095 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
HDAC6-222ENST00000478095 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-222ENST00000478095 APOBEC3HQ6NTF7 200 aaKnown RBP12.54□□□□□ -0.4
HDAC6-222ENST00000478095 HHIPL2Q6UWX4 724 aa12.54□□□□□ -0.4
HDAC6-222ENST00000478095 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
HDAC6-222ENST00000478095 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms