RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-210ENST00000477625 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 ZIC5Q96T25 663 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 TDRD3Q9H7E2 651 aaKnown RBP15.16■□□□□ 0.02
PTPN7-210ENST00000477625 VEZTQ9HBM0 779 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 ZNF70Q9UC06 446 aaPredicted RBP15.16■□□□□ 0.02
PTPN7-210ENST00000477625 THSD7BQ9C0I4 1608 aa15.16■□□□□ 0.02
PTPN7-210ENST00000477625 COL1A1P02452 1464 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-210ENST00000477625 A0A1B0GUL7 405 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 SLC10A3P09131 477 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 PHKA1P46020 1223 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 POLA2Q14181 598 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 SUPT20HL1Q3ZLR7 823 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 SSH3Q8TE77 659 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 TEKT1Q969V4 418 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 C1orf115Q9H7X2 142 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 PRDM10Q9NQV6 1147 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 MAST3O60307 1309 aa15.15■□□□□ 0.02
PTPN7-210ENST00000477625 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 LBX1P52954 281 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-210ENST00000477625 TNFAIP1Q13829 316 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 RASA3Q14644 834 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 ZDHHC15Q96MV8 337 aa15.14■□□□□ 0.01
PTPN7-210ENST00000477625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.14■□□□□ 0.01
PTPN7-210ENST00000477625 CA12O43570 354 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 HSPA8P11142 646 aaKnown RBP15.13■□□□□ 0.01
PTPN7-210ENST00000477625 PRKG1Q13976 671 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
PTPN7-210ENST00000477625 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 HHIPL2Q6UWX4 724 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 RASAL3Q86YV0 1011 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 NEUROD6Q96NK8 337 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
PTPN7-210ENST00000477625 ARAP2Q8WZ64 1704 aa15.12■□□□□ 0.01
PTPN7-210ENST00000477625 PPP1R12BO60237 982 aaPredicted RBP15.12■□□□□ 0.01
PTPN7-210ENST00000477625 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
PTPN7-210ENST00000477625 LDLRAD1Q5T700 205 aa15.12■□□□□ 0.01
PTPN7-210ENST00000477625 NBPF12Q5TAG4 269 aaPredicted RBP15.12■□□□□ 0.01
PTPN7-210ENST00000477625 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
PTPN7-210ENST00000477625 ANGEL1Q9UNK9 670 aaKnown RBP15.12■□□□□ 0.01
PTPN7-210ENST00000477625 ECM29Q5VYK3 1845 aa15.12■□□□□ 0.01
PTPN7-210ENST00000477625 TCP10L2B9ZVM9 353 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 LDHBP07195 334 aaKnown RBP15.11■□□□□ 0.01
PTPN7-210ENST00000477625 PRDX5P30044 214 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 TNNI2P48788 182 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 RASGRF1Q13972 1273 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 MAP3K11Q16584 847 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-210ENST00000477625 ZGPATQ8N5A5 531 aaKnown RBP15.11■□□□□ 0.01
PTPN7-210ENST00000477625 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
PTPN7-210ENST00000477625 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
PTPN7-210ENST00000477625 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-210ENST00000477625 FKBP1CQ5VVH2 108 aa15.1■□□□□ 0.01
PTPN7-210ENST00000477625 CEP85Q6P2H3 762 aa15.1■□□□□ 0.01
PTPN7-210ENST00000477625 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
PTPN7-210ENST00000477625 TEPSINQ96N21 525 aa15.1■□□□□ 0.01
PTPN7-210ENST00000477625 PDS5AQ29RF7 1337 aaKnown RBP15.1■□□□□ 0.01
PTPN7-210ENST00000477625 UNCXA6NJT0 531 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 USP2O75604 605 aaPredicted RBP15.09■□□□□ 0.01
PTPN7-210ENST00000477625 CACNB3P54284 484 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 TMEM39BQ9GZU3 492 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 TMOD2Q9NZR1 351 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 TSKSQ9UJT2 592 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 DDX19BQ9UMR2 479 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 COG6Q9Y2V7 657 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
PTPN7-210ENST00000477625 TNNI3KQ59H18 835 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
PTPN7-210ENST00000477625 FAM83AQ86UY5 434 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 HMG20BQ9P0W2 317 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 ABCF2Q9UG63 623 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 DAGLAQ9Y4D2 1042 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 FPGT-TNNI3KV9GXZ4 949 aa15.08■□□□□ 0
PTPN7-210ENST00000477625 MYH13Q9UKX3 1938 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
PTPN7-210ENST00000477625 IREB2P48200 963 aaKnown RBP15.07■□□□□ 0
PTPN7-210ENST00000477625 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 SPATA5Q8NB90 893 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
PTPN7-210ENST00000477625 ZBTB40Q9NUA8 1239 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 RNF186Q9NXI6 227 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 SAGE1Q9NXZ1 904 aa15.07■□□□□ 0
PTPN7-210ENST00000477625 TRPA1O75762 1119 aa15.06■□□□□ 0
PTPN7-210ENST00000477625 UQCRFS1P1P0C7P4 283 aa15.06■□□□□ 0
PTPN7-210ENST00000477625 PDE3AQ14432 1141 aa15.06■□□□□ 0
PTPN7-210ENST00000477625 SPRYD7Q5W111 196 aa15.06■□□□□ 0
PTPN7-210ENST00000477625 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
PTPN7-210ENST00000477625 SLF2Q8IX21 1173 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms