RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
SMIM4-202ENST00000476842 SPDYE6P0CI01 402 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 PRDX5P30044 214 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 RBM5P52756 815 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMIM4-202ENST00000476842 ANGEL2Q5VTE6 544 aaKnown RBP21.79■■□□□ 1.08
SMIM4-202ENST00000476842 HHIPL2Q6UWX4 724 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 PI16Q6UXB8 463 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 USP48Q86UV5 1035 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 TEKT1Q969V4 418 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 GCC1Q96CN9 775 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 PRMT6Q96LA8 375 aaPredicted RBP21.79■■□□□ 1.08
SMIM4-202ENST00000476842 GLIS2Q9BZE0 524 aaPredicted RBP21.79■■□□□ 1.08
SMIM4-202ENST00000476842 GGA3Q9NZ52 723 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 PCDHAC2Q9Y5I4 1007 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 PITPNM2Q9BZ72 1349 aa21.79■■□□□ 1.08
SMIM4-202ENST00000476842 APLP1P51693 650 aa21.78■■□□□ 1.08
SMIM4-202ENST00000476842 KRT26Q7Z3Y9 468 aa21.78■■□□□ 1.08
SMIM4-202ENST00000476842 SNRKQ9NRH2 765 aa21.78■■□□□ 1.08
SMIM4-202ENST00000476842 ABCF2Q9UG63 623 aa21.78■■□□□ 1.08
SMIM4-202ENST00000476842 BCL11AQ9H165 835 aa21.77■■□□□ 1.08
SMIM4-202ENST00000476842 MYO1BO43795 1136 aa21.76■■□□□ 1.07
SMIM4-202ENST00000476842 TBC1D9Q6ZT07 1266 aa21.76■■□□□ 1.07
SMIM4-202ENST00000476842 ERICH6Q7L0X2 663 aa21.76■■□□□ 1.07
SMIM4-202ENST00000476842 SULF1Q8IWU6 871 aa21.76■■□□□ 1.07
SMIM4-202ENST00000476842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMIM4-202ENST00000476842 ZDHHC15Q96MV8 337 aa21.76■■□□□ 1.07
SMIM4-202ENST00000476842 TRAF5O00463 557 aa21.75■■□□□ 1.07
SMIM4-202ENST00000476842 IGHDP01880 384 aa21.75■■□□□ 1.07
SMIM4-202ENST00000476842 CYP2E1P05181 493 aaPredicted RBP21.75■■□□□ 1.07
SMIM4-202ENST00000476842 ZAP70P43403 619 aa21.75■■□□□ 1.07
SMIM4-202ENST00000476842 IGSF3O75054 1194 aa21.74■■□□□ 1.07
SMIM4-202ENST00000476842 FMR1Q06787 632 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMIM4-202ENST00000476842 APOBEC3HQ6NTF7 200 aaKnown RBP21.74■■□□□ 1.07
SMIM4-202ENST00000476842 APOBEC3FQ8IUX4 373 aaKnown RBP21.74■■□□□ 1.07
SMIM4-202ENST00000476842 FAM163AQ96GL9 167 aaPredicted RBP21.74■■□□□ 1.07
SMIM4-202ENST00000476842 ADM5C9JUS6 153 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 ATP5JP18859 108 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 DIXDC1Q155Q3 683 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 ANKRD45Q5TZF3 282 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 DZIP1Q86YF9 867 aaKnown RBP21.73■■□□□ 1.07
SMIM4-202ENST00000476842 SLF2Q8IX21 1173 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 SMC5Q8IY18 1101 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 TDRD3Q9H7E2 651 aaKnown RBP21.73■■□□□ 1.07
SMIM4-202ENST00000476842 LRP2BPQ9P2M1 347 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 ZNF70Q9UC06 446 aaPredicted RBP21.73■■□□□ 1.07
SMIM4-202ENST00000476842 AOX1Q06278 1338 aa21.73■■□□□ 1.07
SMIM4-202ENST00000476842 MECOMQ03112 1051 aa21.72■■□□□ 1.07
SMIM4-202ENST00000476842 SPDYE2Q495Y8 402 aa21.72■■□□□ 1.07
SMIM4-202ENST00000476842 DLK2Q6UY11 383 aa21.72■■□□□ 1.07
SMIM4-202ENST00000476842 NSUN4Q96CB9 384 aaKnown RBP21.72■■□□□ 1.07
SMIM4-202ENST00000476842 RAI14Q9P0K7 980 aa21.72■■□□□ 1.07
SMIM4-202ENST00000476842 DAGLAQ9Y4D2 1042 aa21.72■■□□□ 1.07
SMIM4-202ENST00000476842 CLRN2A0PK11 232 aa21.71■■□□□ 1.07
SMIM4-202ENST00000476842 TMEM88BA6NKF7 163 aa21.71■■□□□ 1.07
SMIM4-202ENST00000476842 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
SMIM4-202ENST00000476842 CST9Q5W186 159 aa21.71■■□□□ 1.07
SMIM4-202ENST00000476842 PIH1D3Q9NQM4 214 aaKnown RBP21.71■■□□□ 1.07
SMIM4-202ENST00000476842 ZBTB47Q9UFB7 747 aaPredicted RBP21.71■■□□□ 1.07
SMIM4-202ENST00000476842 LDHCP07864 332 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 GSTO1P78417 241 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 ZNF384Q8TF68 577 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 CREBZFQ9NS37 354 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 ECHDC1Q9NTX5 307 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 SCAF8Q9UPN6 1271 aaKnown RBP21.7■■□□□ 1.06
SMIM4-202ENST00000476842 NDUFB9Q9Y6M9 179 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 GAKO14976 1311 aa21.7■■□□□ 1.06
SMIM4-202ENST00000476842 CELF2O95319 508 aaKnown RBP21.69■■□□□ 1.06
SMIM4-202ENST00000476842 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
SMIM4-202ENST00000476842 ANTXR1Q9H6X2 564 aa21.69■■□□□ 1.06
SMIM4-202ENST00000476842 VEZTQ9HBM0 779 aa21.69■■□□□ 1.06
SMIM4-202ENST00000476842 TTF1Q15361 905 aaPredicted RBP21.68■■□□□ 1.06
SMIM4-202ENST00000476842 FKBP1CQ5VVH2 108 aa21.68■■□□□ 1.06
SMIM4-202ENST00000476842 CDCA5Q96FF9 252 aa21.68■■□□□ 1.06
SMIM4-202ENST00000476842 GPATCH3Q96I76 525 aa21.68■■□□□ 1.06
SMIM4-202ENST00000476842 BOLA2Q9H3K6 86 aa21.68■■□□□ 1.06
SMIM4-202ENST00000476842 PPP2R3BQ9Y5P8 575 aa21.68■■□□□ 1.06
SMIM4-202ENST00000476842 MROH7-TTC4A0A0A0MT08 1334 aa21.67■■□□□ 1.06
SMIM4-202ENST00000476842 GPR75-ASB3A0A0A6YYF3 556 aa21.67■■□□□ 1.06
SMIM4-202ENST00000476842 TNFAIP1Q13829 316 aa21.67■■□□□ 1.06
SMIM4-202ENST00000476842 CDC42EP5Q6NZY7 148 aa21.67■■□□□ 1.06
SMIM4-202ENST00000476842 HAUS7Q99871 368 aa21.67■■□□□ 1.06
SMIM4-202ENST00000476842 HTRA3P83110 453 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 RASA3Q14644 834 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 PRAMEF18Q5VWM3 479 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 NAA16Q6N069 864 aaPredicted RBP21.66■■□□□ 1.06
SMIM4-202ENST00000476842 TMED8Q6PL24 325 aaPredicted RBP21.66■■□□□ 1.06
SMIM4-202ENST00000476842 DNAJC2Q99543 621 aaKnown RBP21.66■■□□□ 1.06
SMIM4-202ENST00000476842 ZNF408Q9H9D4 720 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 USP40Q9NVE5 1235 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 TMOD2Q9NZR1 351 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 MYH13Q9UKX3 1938 aa21.66■■□□□ 1.06
SMIM4-202ENST00000476842 TTC41PQ6P2S7 1318 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 TCP10L2B9ZVM9 353 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 GOLIM4O00461 696 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 IDH1O75874 414 aaKnown RBP21.65■■□□□ 1.06
SMIM4-202ENST00000476842 TNNI2P48788 182 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 NUCB1Q02818 461 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 B4GALNT3Q6L9W6 998 aa21.65■■□□□ 1.06
SMIM4-202ENST00000476842 OTUD7AQ8TE49 926 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms