RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PI16Q6UXB8 463 aa20.74■□□□□ 0.91
SCAF11-206ENST00000474828 FAM163AQ96GL9 167 aaPredicted RBP20.74■□□□□ 0.91
SCAF11-206ENST00000474828 SALL3Q9BXA9 1300 aa20.74■□□□□ 0.91
SCAF11-206ENST00000474828 APBB1O00213 710 aa20.73■□□□□ 0.91
SCAF11-206ENST00000474828 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
SCAF11-206ENST00000474828 CYP2E1P05181 493 aaPredicted RBP20.73■□□□□ 0.91
SCAF11-206ENST00000474828 ATP5JP18859 108 aa20.73■□□□□ 0.91
SCAF11-206ENST00000474828 NBPF9Q3BBW0 867 aa20.73■□□□□ 0.91
SCAF11-206ENST00000474828 CNTROBQ8N137 903 aa20.73■□□□□ 0.91
SCAF11-206ENST00000474828 ZDHHC15Q96MV8 337 aa20.73■□□□□ 0.91
SCAF11-206ENST00000474828 CENPBP07199 599 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-206ENST00000474828 CRKP46108 304 aa20.72■□□□□ 0.91
SCAF11-206ENST00000474828 DLGAP5Q15398 846 aa20.72■□□□□ 0.91
SCAF11-206ENST00000474828 CFAP100Q494V2 611 aa20.72■□□□□ 0.91
SCAF11-206ENST00000474828 MAP1SQ66K74 1059 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-206ENST00000474828 SPTY2D1Q68D10 685 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-206ENST00000474828 ZNF384Q8TF68 577 aa20.72■□□□□ 0.91
SCAF11-206ENST00000474828 PRMT6Q96LA8 375 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-206ENST00000474828 GAKO14976 1311 aa20.72■□□□□ 0.91
SCAF11-206ENST00000474828 ASTN2O75129 1339 aaPredicted RBP20.72■□□□□ 0.91
SCAF11-206ENST00000474828 F8W031 263 aaPredicted RBP20.71■□□□□ 0.91
SCAF11-206ENST00000474828 LDHBP07195 334 aaKnown RBP20.71■□□□□ 0.91
SCAF11-206ENST00000474828 RBM26Q5T8P6 1007 aaKnown RBP20.71■□□□□ 0.91
SCAF11-206ENST00000474828 TMED8Q6PL24 325 aaPredicted RBP20.71■□□□□ 0.91
SCAF11-206ENST00000474828 ZAP70P43403 619 aa20.7■□□□□ 0.9
SCAF11-206ENST00000474828 APOBEC3HQ6NTF7 200 aaKnown RBP20.7■□□□□ 0.9
SCAF11-206ENST00000474828 CDC37L1Q7L3B6 337 aa20.7■□□□□ 0.9
SCAF11-206ENST00000474828 TEKT1Q969V4 418 aa20.7■□□□□ 0.9
SCAF11-206ENST00000474828 CLEC11AQ9Y240 323 aa20.7■□□□□ 0.9
SCAF11-206ENST00000474828 PCDHAC2Q9Y5I4 1007 aa20.7■□□□□ 0.9
SCAF11-206ENST00000474828 ECM29Q5VYK3 1845 aa20.69■□□□□ 0.9
SCAF11-206ENST00000474828 DNAJC5GQ8N7S2 189 aa20.69■□□□□ 0.9
SCAF11-206ENST00000474828 NSUN4Q96CB9 384 aaKnown RBP20.69■□□□□ 0.9
SCAF11-206ENST00000474828 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
SCAF11-206ENST00000474828 AOX1Q06278 1338 aa20.69■□□□□ 0.9
SCAF11-206ENST00000474828 NUCB1Q02818 461 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 SPDYE2Q495Y8 402 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 ANGEL2Q5VTE6 544 aaKnown RBP20.68■□□□□ 0.9
SCAF11-206ENST00000474828 TBC1D9Q6ZT07 1266 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 HAUS7Q99871 368 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 SNRKQ9NRH2 765 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 ECHDC1Q9NTX5 307 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 DAGLAQ9Y4D2 1042 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 TTC41PQ6P2S7 1318 aa20.68■□□□□ 0.9
SCAF11-206ENST00000474828 MECOMQ03112 1051 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 FKBP1CQ5VVH2 108 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 DCPSQ96C86 337 aaKnown RBP20.67■□□□□ 0.9
SCAF11-206ENST00000474828 PIH1D3Q9NQM4 214 aaKnown RBP20.67■□□□□ 0.9
SCAF11-206ENST00000474828 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 DOCK2Q92608 1830 aa20.67■□□□□ 0.9
SCAF11-206ENST00000474828 DIXDC1Q155Q3 683 aa20.66■□□□□ 0.9
SCAF11-206ENST00000474828 ANKRD45Q5TZF3 282 aa20.66■□□□□ 0.9
SCAF11-206ENST00000474828 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
SCAF11-206ENST00000474828 APOBEC3FQ8IUX4 373 aaKnown RBP20.66■□□□□ 0.9
SCAF11-206ENST00000474828 GLIS2Q9BZE0 524 aaPredicted RBP20.66■□□□□ 0.9
SCAF11-206ENST00000474828 MAST2Q6P0Q8 1798 aa20.66■□□□□ 0.9
SCAF11-206ENST00000474828 HTRA3P83110 453 aa20.65■□□□□ 0.9
SCAF11-206ENST00000474828 SLF2Q8IX21 1173 aa20.65■□□□□ 0.9
SCAF11-206ENST00000474828 PI4K2BQ8TCG2 481 aa20.65■□□□□ 0.9
SCAF11-206ENST00000474828 RFX7Q2KHR2 1363 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 GPR75-ASB3A0A0A6YYF3 556 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 MYO1BO43795 1136 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 MAP4K4O95819 1239 aaPredicted RBP20.64■□□□□ 0.89
SCAF11-206ENST00000474828 TTF1Q15361 905 aaPredicted RBP20.64■□□□□ 0.89
SCAF11-206ENST00000474828 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 SULF1Q8IWU6 871 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 OTUD7AQ8TE49 926 aaPredicted RBP20.64■□□□□ 0.89
SCAF11-206ENST00000474828 ANTXR1Q9H6X2 564 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 ZNF70Q9UC06 446 aaPredicted RBP20.64■□□□□ 0.89
SCAF11-206ENST00000474828 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.89
SCAF11-206ENST00000474828 GSTO1P78417 241 aa20.63■□□□□ 0.89
SCAF11-206ENST00000474828 CST9Q5W186 159 aa20.63■□□□□ 0.89
SCAF11-206ENST00000474828 USP48Q86UV5 1035 aa20.63■□□□□ 0.89
SCAF11-206ENST00000474828 DZIP1Q86YF9 867 aaKnown RBP20.63■□□□□ 0.89
SCAF11-206ENST00000474828 TDRD3Q9H7E2 651 aaKnown RBP20.63■□□□□ 0.89
SCAF11-206ENST00000474828 LRP2BPQ9P2M1 347 aa20.63■□□□□ 0.89
SCAF11-206ENST00000474828 ADM5C9JUS6 153 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 TRAF5O00463 557 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 LDHCP07864 332 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 MX1P20591 662 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
SCAF11-206ENST00000474828 PPP4CP60510 307 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 OSBPL3Q9H4L5 887 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
SCAF11-206ENST00000474828 POLR2AP24928 1970 aaKnown RBP20.62■□□□□ 0.89
SCAF11-206ENST00000474828 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
SCAF11-206ENST00000474828 RHBDL3P58872 404 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 CDC42EP5Q6NZY7 148 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 FAM83AQ86UY5 434 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 KLRG1Q96E93 195 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 BOLA2Q9H3K6 86 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 RAI14Q9P0K7 980 aa20.61■□□□□ 0.89
SCAF11-206ENST00000474828 MYH2Q9UKX2 1941 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms