RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 HUNKP57058 714 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
VAMP4-203ENST00000474047 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
VAMP4-203ENST00000474047 GRIK5Q16478 980 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 TNNI3KQ59H18 835 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 SAPCD2Q86UD0 394 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
VAMP4-203ENST00000474047 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
VAMP4-203ENST00000474047 FPGT-TNNI3KV9GXZ4 949 aa17.5■□□□□ 0.39
VAMP4-203ENST00000474047 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
VAMP4-203ENST00000474047 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
VAMP4-203ENST00000474047 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
VAMP4-203ENST00000474047 CAPNS2Q96L46 248 aa17.48■□□□□ 0.39
VAMP4-203ENST00000474047 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
VAMP4-203ENST00000474047 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
VAMP4-203ENST00000474047 ARAP2Q8WZ64 1704 aa17.48■□□□□ 0.39
VAMP4-203ENST00000474047 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
VAMP4-203ENST00000474047 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
VAMP4-203ENST00000474047 TNFAIP1Q13829 316 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
VAMP4-203ENST00000474047 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 DEFB129Q9H1M3 183 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 APBB1O00213 710 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 TMOD2Q9NZR1 351 aa17.47■□□□□ 0.39
VAMP4-203ENST00000474047 ZNF70Q9UC06 446 aaPredicted RBP17.47■□□□□ 0.39
VAMP4-203ENST00000474047 PRDX5P30044 214 aa17.46■□□□□ 0.39
VAMP4-203ENST00000474047 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
VAMP4-203ENST00000474047 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 TNNI2P48788 182 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 FKBP1BP68106 108 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
VAMP4-203ENST00000474047 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 ZDHHC15Q96MV8 337 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 DBNDD2Q9BQY9 259 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
VAMP4-203ENST00000474047 COL1A1P02452 1464 aaPredicted RBP17.45■□□□□ 0.38
VAMP4-203ENST00000474047 TCP10L2B9ZVM9 353 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 PRKG1Q13976 671 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ECM29Q5VYK3 1845 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 PDS5AQ29RF7 1337 aaKnown RBP17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ZBTB22O15209 634 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ARID4AP29374 1257 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ZNF157P51786 506 aaPredicted RBP17.44■□□□□ 0.38
VAMP4-203ENST00000474047 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 RGMBQ6NW40 437 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 AACSQ86V21 672 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
VAMP4-203ENST00000474047 AOX1Q06278 1338 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 RASA3Q14644 834 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
VAMP4-203ENST00000474047 UBE2Q2LH0YL09 131 aa17.42■□□□□ 0.38
VAMP4-203ENST00000474047 CLASRPQ8N2M8 674 aaKnown RBP17.42■□□□□ 0.38
VAMP4-203ENST00000474047 CCDC102AQ96A19 550 aa17.42■□□□□ 0.38
VAMP4-203ENST00000474047 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
VAMP4-203ENST00000474047 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
VAMP4-203ENST00000474047 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
VAMP4-203ENST00000474047 LRP2BPQ9P2M1 347 aa17.42■□□□□ 0.38
VAMP4-203ENST00000474047 PPP1R12BO60237 982 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 MCAMP43121 646 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 PI16Q6UXB8 463 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 BEGAINQ9BUH8 593 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 HSPA1AP0DMV8 641 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 HSPA1BP0DMV9 641 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 CACNB3P54284 484 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 DBNLQ9UJU6 430 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 ANGEL1Q9UNK9 670 aaKnown RBP17.41■□□□□ 0.38
VAMP4-203ENST00000474047 DAGLAQ9Y4D2 1042 aa17.41■□□□□ 0.38
VAMP4-203ENST00000474047 AOC2O75106 756 aa17.4■□□□□ 0.38
VAMP4-203ENST00000474047 MAP2K2P36507 400 aa17.4■□□□□ 0.38
VAMP4-203ENST00000474047 GSTO1P78417 241 aa17.4■□□□□ 0.38
VAMP4-203ENST00000474047 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
VAMP4-203ENST00000474047 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
VAMP4-203ENST00000474047 PAPPA2Q9BXP8 1791 aa17.39■□□□□ 0.37
VAMP4-203ENST00000474047 LDHCP07864 332 aa17.39■□□□□ 0.37
VAMP4-203ENST00000474047 NOGQ13253 232 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms