RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CRKP46108 304 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 NBPF9Q3BBW0 867 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 DZIP1Q86YF9 867 aaKnown RBP15.16■□□□□ 0.02
DDX56-209ENST00000473924 CNTROBQ8N137 903 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 GPATCH3Q96I76 525 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 GGA3Q9NZ52 723 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
DDX56-209ENST00000473924 MYO1BO43795 1136 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 ZAP70P43403 619 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
DDX56-209ENST00000473924 ANGEL2Q5VTE6 544 aaKnown RBP15.15■□□□□ 0.02
DDX56-209ENST00000473924 B4GALNT3Q6L9W6 998 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 MTMR14Q8NCE2 650 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 PGAP2Q9UHJ9 254 aa15.15■□□□□ 0.02
DDX56-209ENST00000473924 SULF1Q8IWU6 871 aa15.14■□□□□ 0.01
DDX56-209ENST00000473924 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
DDX56-209ENST00000473924 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
DDX56-209ENST00000473924 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
DDX56-209ENST00000473924 PCDHAC2Q9Y5I4 1007 aa15.14■□□□□ 0.01
DDX56-209ENST00000473924 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
DDX56-209ENST00000473924 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
DDX56-209ENST00000473924 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 CDC37L1Q7L3B6 337 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDX56-209ENST00000473924 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
DDX56-209ENST00000473924 PRMT6Q96LA8 375 aaPredicted RBP15.13■□□□□ 0.01
DDX56-209ENST00000473924 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
DDX56-209ENST00000473924 MRIQ9BWK5 157 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 ECHDC1Q9NTX5 307 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 NDUFB9Q9Y6M9 179 aa15.13■□□□□ 0.01
DDX56-209ENST00000473924 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 ATP5JP18859 108 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 HHIPL2Q6UWX4 724 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 USP48Q86UV5 1035 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 ZDHHC15Q96MV8 337 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 GLIS2Q9BZE0 524 aaPredicted RBP15.12■□□□□ 0.01
DDX56-209ENST00000473924 BOLA2Q9H3K6 86 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 PITPNM2Q9BZ72 1349 aa15.12■□□□□ 0.01
DDX56-209ENST00000473924 CLRN2A0PK11 232 aa15.11■□□□□ 0.01
DDX56-209ENST00000473924 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
DDX56-209ENST00000473924 ITGBL1O95965 494 aaPredicted RBP15.11■□□□□ 0.01
DDX56-209ENST00000473924 GSTO1P78417 241 aa15.11■□□□□ 0.01
DDX56-209ENST00000473924 MECOMQ03112 1051 aa15.11■□□□□ 0.01
DDX56-209ENST00000473924 TTF1Q15361 905 aaPredicted RBP15.11■□□□□ 0.01
DDX56-209ENST00000473924 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
DDX56-209ENST00000473924 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
DDX56-209ENST00000473924 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
DDX56-209ENST00000473924 ADM5C9JUS6 153 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 GOLIM4O00461 696 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 TRAF5O00463 557 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 ERC2O15083 957 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 LDHCP07864 332 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 MX1P20591 662 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 CHD1LQ86WJ1 897 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
DDX56-209ENST00000473924 PIH1D3Q9NQM4 214 aaKnown RBP15.1■□□□□ 0.01
DDX56-209ENST00000473924 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
DDX56-209ENST00000473924 DAGLAQ9Y4D2 1042 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 TTC41PQ6P2S7 1318 aa15.1■□□□□ 0.01
DDX56-209ENST00000473924 ECM29Q5VYK3 1845 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 NUCB1Q02818 461 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 MAP3K12Q12852 859 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 NAA16Q6N069 864 aaPredicted RBP15.09■□□□□ 0.01
DDX56-209ENST00000473924 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
DDX56-209ENST00000473924 HAUS7Q99871 368 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 NOL10Q9BSC4 688 aaKnown RBP15.09■□□□□ 0.01
DDX56-209ENST00000473924 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 PAG1Q9NWQ8 432 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 ZNF70Q9UC06 446 aaPredicted RBP15.09■□□□□ 0.01
DDX56-209ENST00000473924 MROH7-TTC4A0A0A0MT08 1334 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
DDX56-209ENST00000473924 POLR2AP24928 1970 aaKnown RBP15.09■□□□□ 0.01
DDX56-209ENST00000473924 MYH2Q9UKX2 1941 aa15.08■□□□□ 0
DDX56-209ENST00000473924 IGSF3O75054 1194 aa15.08■□□□□ 0
DDX56-209ENST00000473924 APLP1P51693 650 aa15.08■□□□□ 0
DDX56-209ENST00000473924 TNFAIP1Q13829 316 aa15.08■□□□□ 0
DDX56-209ENST00000473924 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
DDX56-209ENST00000473924 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
DDX56-209ENST00000473924 AOX1Q06278 1338 aa15.08■□□□□ 0
DDX56-209ENST00000473924 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
DDX56-209ENST00000473924 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
DDX56-209ENST00000473924 HSPA6P17066 643 aa15.07■□□□□ 0
DDX56-209ENST00000473924 BTDP43251 543 aa15.07■□□□□ 0
DDX56-209ENST00000473924 TNNI2P48788 182 aa15.07■□□□□ 0
DDX56-209ENST00000473924 FMR1Q06787 632 aaKnown RBP eCLIP15.07■□□□□ 0
DDX56-209ENST00000473924 DLK2Q6UY11 383 aa15.07■□□□□ 0
DDX56-209ENST00000473924 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
DDX56-209ENST00000473924 FAM163AQ96GL9 167 aaPredicted RBP15.07■□□□□ 0
DDX56-209ENST00000473924 USP40Q9NVE5 1235 aa15.07■□□□□ 0
DDX56-209ENST00000473924 GAKO14976 1311 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms