RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SPATA5Q8NB90 893 aa24.23■■□□□ 1.47
HDAC7-220ENST00000471235 SERPINA10Q9UK55 444 aa24.23■■□□□ 1.47
HDAC7-220ENST00000471235 MAST3O60307 1309 aa24.23■■□□□ 1.47
HDAC7-220ENST00000471235 CDK5RAP2Q96SN8 1893 aa24.22■■□□□ 1.47
HDAC7-220ENST00000471235 AOX1Q06278 1338 aa24.22■■□□□ 1.47
HDAC7-220ENST00000471235 PITPNM2Q9BZ72 1349 aa24.22■■□□□ 1.47
HDAC7-220ENST00000471235 SMARCA5O60264 1052 aaPredicted RBP24.22■■□□□ 1.47
HDAC7-220ENST00000471235 CRKP46108 304 aa24.22■■□□□ 1.47
HDAC7-220ENST00000471235 ZNF512BQ96KM6 892 aaPredicted RBP24.22■■□□□ 1.47
HDAC7-220ENST00000471235 SPDYE2BA6NHP3 402 aa24.21■■□□□ 1.47
HDAC7-220ENST00000471235 TRAF5O00463 557 aa24.21■■□□□ 1.47
HDAC7-220ENST00000471235 SPDYE6P0CI01 402 aa24.21■■□□□ 1.47
HDAC7-220ENST00000471235 FMR1Q06787 632 aaKnown RBP eCLIP24.21■■□□□ 1.47
HDAC7-220ENST00000471235 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
HDAC7-220ENST00000471235 ZGPATQ8N5A5 531 aaKnown RBP24.21■■□□□ 1.47
HDAC7-220ENST00000471235 DCPSQ96C86 337 aaKnown RBP24.21■■□□□ 1.47
HDAC7-220ENST00000471235 BCL11AQ9H165 835 aa24.21■■□□□ 1.47
HDAC7-220ENST00000471235 ADM5C9JUS6 153 aa24.2■■□□□ 1.46
HDAC7-220ENST00000471235 LDHBP07195 334 aaKnown RBP24.2■■□□□ 1.46
HDAC7-220ENST00000471235 IFIT2P09913 472 aaKnown RBP24.2■■□□□ 1.46
HDAC7-220ENST00000471235 HDLBPQ00341 1268 aaKnown RBP24.2■■□□□ 1.46
HDAC7-220ENST00000471235 CDC37L1Q7L3B6 337 aa24.2■■□□□ 1.46
HDAC7-220ENST00000471235 APLP1P51693 650 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 RBM5P52756 815 aaKnown RBP eCLIP24.19■■□□□ 1.46
HDAC7-220ENST00000471235 KRT26Q7Z3Y9 468 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 USP48Q86UV5 1035 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 TEKT1Q969V4 418 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 PRMT6Q96LA8 375 aaPredicted RBP24.19■■□□□ 1.46
HDAC7-220ENST00000471235 SNRKQ9NRH2 765 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 ABCF2Q9UG63 623 aa24.19■■□□□ 1.46
HDAC7-220ENST00000471235 FOCADQ5VW36 1801 aa24.18■■□□□ 1.46
HDAC7-220ENST00000471235 DIXDC1Q155Q3 683 aa24.17■■□□□ 1.46
HDAC7-220ENST00000471235 DLK2Q6UY11 383 aa24.17■■□□□ 1.46
HDAC7-220ENST00000471235 TBC1D9Q6ZT07 1266 aa24.17■■□□□ 1.46
HDAC7-220ENST00000471235 SULF1Q8IWU6 871 aa24.17■■□□□ 1.46
HDAC7-220ENST00000471235 SCAF8Q9UPN6 1271 aaKnown RBP24.17■■□□□ 1.46
HDAC7-220ENST00000471235 ZAP70P43403 619 aa24.16■■□□□ 1.46
HDAC7-220ENST00000471235 HHIPL2Q6UWX4 724 aa24.16■■□□□ 1.46
HDAC7-220ENST00000471235 APOBEC3FQ8IUX4 373 aaKnown RBP24.16■■□□□ 1.46
HDAC7-220ENST00000471235 ZDHHC15Q96MV8 337 aa24.16■■□□□ 1.46
HDAC7-220ENST00000471235 MRIQ9BWK5 157 aa24.16■■□□□ 1.46
HDAC7-220ENST00000471235 AK9Q5TCS8 1911 aa24.16■■□□□ 1.46
HDAC7-220ENST00000471235 CLRN2A0PK11 232 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 MYO1BO43795 1136 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 SPDYE2Q495Y8 402 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 SPTY2D1Q68D10 685 aaPredicted RBP24.15■■□□□ 1.46
HDAC7-220ENST00000471235 ERICH6Q7L0X2 663 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 DZIP1Q86YF9 867 aaKnown RBP24.15■■□□□ 1.46
HDAC7-220ENST00000471235 DAGLAQ9Y4D2 1042 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 PAPPA2Q9BXP8 1791 aa24.15■■□□□ 1.46
HDAC7-220ENST00000471235 CYP2E1P05181 493 aaPredicted RBP24.14■■□□□ 1.45
HDAC7-220ENST00000471235 HTRA3P83110 453 aa24.14■■□□□ 1.45
HDAC7-220ENST00000471235 GCC1Q96CN9 775 aa24.14■■□□□ 1.45
HDAC7-220ENST00000471235 TDRD3Q9H7E2 651 aaKnown RBP24.14■■□□□ 1.45
HDAC7-220ENST00000471235 NDUFB9Q9Y6M9 179 aa24.14■■□□□ 1.45
HDAC7-220ENST00000471235 OTOFQ9HC10 1997 aa24.13■■□□□ 1.45
HDAC7-220ENST00000471235 ZNF384Q8TF68 577 aa24.13■■□□□ 1.45
HDAC7-220ENST00000471235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.13■■□□□ 1.45
HDAC7-220ENST00000471235 CDCA5Q96FF9 252 aa24.13■■□□□ 1.45
HDAC7-220ENST00000471235 PIH1D3Q9NQM4 214 aaKnown RBP24.13■■□□□ 1.45
HDAC7-220ENST00000471235 ZNF70Q9UC06 446 aaPredicted RBP24.13■■□□□ 1.45
HDAC7-220ENST00000471235 GAKO14976 1311 aa24.12■■□□□ 1.45
HDAC7-220ENST00000471235 MECOMQ03112 1051 aa24.12■■□□□ 1.45
HDAC7-220ENST00000471235 APOBEC3HQ6NTF7 200 aaKnown RBP24.12■■□□□ 1.45
HDAC7-220ENST00000471235 RWDD1Q9H446 243 aaPredicted RBP24.12■■□□□ 1.45
HDAC7-220ENST00000471235 VEZTQ9HBM0 779 aa24.12■■□□□ 1.45
HDAC7-220ENST00000471235 CREBZFQ9NS37 354 aa24.12■■□□□ 1.45
HDAC7-220ENST00000471235 TMEM88BA6NKF7 163 aa24.11■■□□□ 1.45
HDAC7-220ENST00000471235 CELF2O95319 508 aaKnown RBP24.11■■□□□ 1.45
HDAC7-220ENST00000471235 IGHDP01880 384 aa24.11■■□□□ 1.45
HDAC7-220ENST00000471235 CST9Q5W186 159 aa24.11■■□□□ 1.45
HDAC7-220ENST00000471235 ZNF408Q9H9D4 720 aa24.11■■□□□ 1.45
HDAC7-220ENST00000471235 RAI14Q9P0K7 980 aa24.11■■□□□ 1.45
HDAC7-220ENST00000471235 MROH7-TTC4A0A0A0MT08 1334 aa24.1■■□□□ 1.45
HDAC7-220ENST00000471235 NSUN4Q96CB9 384 aaKnown RBP24.1■■□□□ 1.45
HDAC7-220ENST00000471235 LRP2BPQ9P2M1 347 aa24.1■■□□□ 1.45
HDAC7-220ENST00000471235 SSC5DA1L4H1 1573 aa24.09■■□□□ 1.45
HDAC7-220ENST00000471235 ATP5JP18859 108 aa24.09■■□□□ 1.45
HDAC7-220ENST00000471235 SMC5Q8IY18 1101 aa24.09■■□□□ 1.45
HDAC7-220ENST00000471235 ANTXR1Q9H6X2 564 aa24.09■■□□□ 1.45
HDAC7-220ENST00000471235 ANKRD45Q5TZF3 282 aa24.08■■□□□ 1.45
HDAC7-220ENST00000471235 SLF2Q8IX21 1173 aa24.08■■□□□ 1.45
HDAC7-220ENST00000471235 RFX7Q2KHR2 1363 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 CACNB3P54284 484 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 PRAMEF18Q5VWM3 479 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
HDAC7-220ENST00000471235 FAM163AQ96GL9 167 aaPredicted RBP24.07■■□□□ 1.44
HDAC7-220ENST00000471235 DNAJC2Q99543 621 aaKnown RBP24.07■■□□□ 1.44
HDAC7-220ENST00000471235 DEFB129Q9H1M3 183 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 BOLA2Q9H3K6 86 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 ECHDC1Q9NTX5 307 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 PPP2R3BQ9Y5P8 575 aa24.07■■□□□ 1.44
HDAC7-220ENST00000471235 THSD7BQ9C0I4 1608 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 CNTNAP1P78357 1384 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 TCP10L2B9ZVM9 353 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 GSTO1P78417 241 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 TNFAIP1Q13829 316 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 TSHZ3Q63HK5 1081 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 CDC42EP5Q6NZY7 148 aa24.06■■□□□ 1.44
HDAC7-220ENST00000471235 GPATCH3Q96I76 525 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms