RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 MAP3K12Q12852 859 aa27.87■■■□□ 2.05
SREBF1-208ENST00000469356 PI4K2BQ8TCG2 481 aa27.87■■■□□ 2.05
SREBF1-208ENST00000469356 ADARB2Q9NS39 739 aaKnown RBP27.87■■■□□ 2.05
SREBF1-208ENST00000469356 LDHCP07864 332 aa27.86■■■□□ 2.05
SREBF1-208ENST00000469356 ZNF526Q8TF50 670 aaPredicted RBP27.86■■■□□ 2.05
SREBF1-208ENST00000469356 ZNF280AP59817 542 aaPredicted RBP27.85■■■□□ 2.05
SREBF1-208ENST00000469356 TSHZ3Q63HK5 1081 aa27.85■■■□□ 2.05
SREBF1-208ENST00000469356 ZSCAN25Q6NSZ9 544 aa27.85■■■□□ 2.05
SREBF1-208ENST00000469356 TBC1D9Q6ZT07 1266 aa27.85■■■□□ 2.05
SREBF1-208ENST00000469356 PNMA8AQ86V59 439 aaPredicted RBP27.85■■■□□ 2.05
SREBF1-208ENST00000469356 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.85■■■□□ 2.057e-9■■■□□ 14.9
SREBF1-208ENST00000469356 RRAGCQ9HB90 399 aa27.85■■■□□ 2.05
SREBF1-208ENST00000469356 SERPINA10Q9UK55 444 aa27.85■■■□□ 2.05
SREBF1-208ENST00000469356 PDE4AP27815 886 aa27.84■■■□□ 2.05
SREBF1-208ENST00000469356 PRDX5P30044 214 aa27.84■■■□□ 2.05
SREBF1-208ENST00000469356 TEKT1Q969V4 418 aa27.84■■■□□ 2.05
SREBF1-208ENST00000469356 IDH1O75874 414 aaKnown RBP27.83■■■□□ 2.05
SREBF1-208ENST00000469356 EPHX2P34913 555 aa27.83■■■□□ 2.05
SREBF1-208ENST00000469356 EPS15P42566 896 aa27.83■■■□□ 2.05
SREBF1-208ENST00000469356 RBM5P52756 815 aaKnown RBP eCLIP27.83■■■□□ 2.052e-6■□□□□ 9.6
SREBF1-208ENST00000469356 USP50Q70EL3 339 aaPredicted RBP27.83■■■□□ 2.05
SREBF1-208ENST00000469356 MYOZ2Q9NPC6 264 aa27.83■■■□□ 2.05
SREBF1-208ENST00000469356 DLGAP5Q15398 846 aa27.82■■■□□ 2.04
SREBF1-208ENST00000469356 HHIPL2Q6UWX4 724 aa27.82■■■□□ 2.04
SREBF1-208ENST00000469356 GTF3C3Q9Y5Q9 886 aa27.82■■■□□ 2.04
SREBF1-208ENST00000469356 NDUFB9Q9Y6M9 179 aa27.82■■■□□ 2.04
SREBF1-208ENST00000469356 CNTROBQ8N137 903 aa27.81■■■□□ 2.04
SREBF1-208ENST00000469356 MTMR14Q8NCE2 650 aa27.81■■■□□ 2.04
SREBF1-208ENST00000469356 EVI5LQ96CN4 794 aa27.81■■■□□ 2.04
SREBF1-208ENST00000469356 TAF1DQ9H5J8 278 aaPredicted RBP27.81■■■□□ 2.04
SREBF1-208ENST00000469356 PIH1D3Q9NQM4 214 aaKnown RBP27.81■■■□□ 2.04
SREBF1-208ENST00000469356 TRIM6-TRIM34B2RNG4 842 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 CRKP46108 304 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 MECOMQ03112 1051 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 KIF4BQ2VIQ3 1234 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 NAA16Q6N069 864 aaPredicted RBP27.8■■■□□ 2.04
SREBF1-208ENST00000469356 TICAM2Q86XR7 235 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 NOL10Q9BSC4 688 aaKnown RBP27.8■■■□□ 2.04
SREBF1-208ENST00000469356 ANTXR1Q9H6X2 564 aa27.8■■■□□ 2.04
SREBF1-208ENST00000469356 MYO1BO43795 1136 aa27.79■■■□□ 2.04
SREBF1-208ENST00000469356 CFAP100Q494V2 611 aa27.79■■■□□ 2.04
SREBF1-208ENST00000469356 RBM26Q5T8P6 1007 aaKnown RBP27.79■■■□□ 2.04
SREBF1-208ENST00000469356 KBTBD3Q8NAB2 608 aa27.79■■■□□ 2.04
SREBF1-208ENST00000469356 NSUN4Q96CB9 384 aaKnown RBP27.79■■■□□ 2.04
SREBF1-208ENST00000469356 MYH2Q9UKX2 1941 aa27.78■■■□□ 2.04
SREBF1-208ENST00000469356 GRIK5Q16478 980 aa27.78■■■□□ 2.04
SREBF1-208ENST00000469356 TBC1D10BQ4KMP7 808 aaPredicted RBP27.78■■■□□ 2.04
SREBF1-208ENST00000469356 FAM163AQ96GL9 167 aaPredicted RBP27.78■■■□□ 2.04
SREBF1-208ENST00000469356 NMRK2Q9NPI5 230 aa27.78■■■□□ 2.04
SREBF1-208ENST00000469356 DOCK2Q92608 1830 aa27.77■■■□□ 2.04
SREBF1-208ENST00000469356 POTECB2RU33 542 aa27.77■■■□□ 2.04
SREBF1-208ENST00000469356 ZFYP08048 801 aaPredicted RBP27.77■■■□□ 2.04
SREBF1-208ENST00000469356 SAMD7Q7Z3H4 446 aa27.77■■■□□ 2.04
SREBF1-208ENST00000469356 EDC3Q96F86 508 aaKnown RBP27.77■■■□□ 2.04
SREBF1-208ENST00000469356 MYO5AQ9Y4I1 1855 aaKnown RBP27.76■■■□□ 2.04
SREBF1-208ENST00000469356 MAP4K4O95819 1239 aaPredicted RBP27.76■■■□□ 2.03
SREBF1-208ENST00000469356 RGS3P49796 1198 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 EAPPQ56P03 285 aaPredicted RBP27.76■■■□□ 2.03
SREBF1-208ENST00000469356 TTC22Q5TAA0 569 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 SLC9C2Q5TAH2 1124 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 CERS3Q8IU89 383 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 RILPL2Q969X0 211 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 ZDHHC15Q96MV8 337 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 FSD1Q9BTV5 496 aa27.76■■■□□ 2.03
SREBF1-208ENST00000469356 MAST2Q6P0Q8 1798 aa27.75■■■□□ 2.03
SREBF1-208ENST00000469356 BAG3O95817 575 aa27.75■■■□□ 2.03
SREBF1-208ENST00000469356 MAGEB6Q8N7X4 407 aa27.75■■■□□ 2.03
SREBF1-208ENST00000469356 ZC3H15Q8WU90 426 aaKnown RBP27.75■■■□□ 2.03
SREBF1-208ENST00000469356 MYH7P12883 1935 aa27.75■■■□□ 2.03
SREBF1-208ENST00000469356 SHTN1A0MZ66 631 aa27.74■■■□□ 2.03
SREBF1-208ENST00000469356 CYP7A1P22680 504 aa27.74■■■□□ 2.03
SREBF1-208ENST00000469356 DIXDC1Q155Q3 683 aa27.74■■■□□ 2.03
SREBF1-208ENST00000469356 ZNF784Q8NCA9 323 aaPredicted RBP27.74■■■□□ 2.03
SREBF1-208ENST00000469356 MROH7-TTC4A0A0A0MT08 1334 aa27.74■■■□□ 2.03
SREBF1-208ENST00000469356 SPDYE2BA6NHP3 402 aa27.73■■■□□ 2.03
SREBF1-208ENST00000469356 SPDYE6P0CI01 402 aa27.73■■■□□ 2.03
SREBF1-208ENST00000469356 TMOD2Q9NZR1 351 aa27.73■■■□□ 2.03
SREBF1-208ENST00000469356 CLEC11AQ9Y240 323 aa27.73■■■□□ 2.03
SREBF1-208ENST00000469356 AK9Q5TCS8 1911 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 GAKO14976 1311 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 WNT10BO00744 389 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 PDE6AP16499 860 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 UBE3CQ15386 1083 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 TRPM4Q8TD43 1214 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 DAGLAQ9Y4D2 1042 aa27.72■■■□□ 2.03
SREBF1-208ENST00000469356 HIP1O00291 1037 aa27.71■■■□□ 2.03
SREBF1-208ENST00000469356 PLCG2P16885 1265 aa27.71■■■□□ 2.03
SREBF1-208ENST00000469356 ADD2P35612 726 aa27.71■■■□□ 2.03
SREBF1-208ENST00000469356 RNF113AO15541 343 aaKnown RBP27.7■■■□□ 2.03
SREBF1-208ENST00000469356 LDHDQ86WU2 507 aa27.7■■■□□ 2.03
SREBF1-208ENST00000469356 ZBED3Q96IU2 234 aaPredicted RBP27.7■■■□□ 2.03
SREBF1-208ENST00000469356 RFX7Q2KHR2 1363 aa27.7■■■□□ 2.02
SREBF1-208ENST00000469356 ZNF532Q9HCE3 1301 aa27.7■■■□□ 2.02
SREBF1-208ENST00000469356 GPR75-ASB3A0A0A6YYF3 556 aa27.69■■■□□ 2.02
SREBF1-208ENST00000469356 DCPSQ96C86 337 aaKnown RBP27.69■■■□□ 2.02
SREBF1-208ENST00000469356 PRMT6Q96LA8 375 aaPredicted RBP27.69■■■□□ 2.02
SREBF1-208ENST00000469356 BTDP43251 543 aa27.68■■■□□ 2.02
SREBF1-208ENST00000469356 NBPF9Q3BBW0 867 aa27.68■■■□□ 2.02
SREBF1-208ENST00000469356 ECM29Q5VYK3 1845 aa27.68■■■□□ 2.02
SREBF1-208ENST00000469356 PITPNM2Q9BZ72 1349 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms