RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 RFX5P48382 616 aaPredicted RBP14.29□□□□□ -0.12
USP11-206ENST00000469080 SIK1P57059 783 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 SUSD4Q5VX71 490 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 GNPATO15228 680 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 PRC1O43663 620 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 ADCY5O95622 1261 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
USP11-206ENST00000469080 TICAM2Q86XR7 235 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 HAUS7Q99871 368 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 ZSWIM6Q9HCJ5 1215 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 MTMR6Q9Y217 621 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 E7EWF7 191 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 PRKAB2O43741 272 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 FGAP02671 866 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 LIG1P18858 919 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
USP11-206ENST00000469080 STOX1Q6ZVD7 989 aa14.29□□□□□ -0.12
USP11-206ENST00000469080 C16orf45Q96MC5 204 aaPredicted RBP14.29□□□□□ -0.12
USP11-206ENST00000469080 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP11-206ENST00000469080 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
USP11-206ENST00000469080 CTIFO43310 598 aaKnown RBP14.28□□□□□ -0.12
USP11-206ENST00000469080 MBD4O95243 580 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 SH2B1Q9NRF2 756 aaPredicted RBP14.28□□□□□ -0.12
USP11-206ENST00000469080 MAST3O60307 1309 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 RANBP6O60518 1105 aaKnown RBP14.28□□□□□ -0.12
USP11-206ENST00000469080 CYP2C19P33261 490 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 ANKRD1Q15327 319 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 TTLL11Q8NHH1 800 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 NWD1Q149M9 1564 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 CTSWP56202 376 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 STK38Q15208 465 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 CCDC112Q8NEF3 446 aa14.28□□□□□ -0.12
USP11-206ENST00000469080 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
USP11-206ENST00000469080 ZNF532Q9HCE3 1301 aa14.27□□□□□ -0.12
USP11-206ENST00000469080 PDCP20941 246 aa14.27□□□□□ -0.12
USP11-206ENST00000469080 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.12
USP11-206ENST00000469080 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
USP11-206ENST00000469080 ZPR1O75312 459 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 ADD1P35611 737 aaKnown RBP14.27□□□□□ -0.13
USP11-206ENST00000469080 MCAMP43121 646 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 KRT32Q14532 448 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 CCDC102BQ68D86 513 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 SYNE3Q6ZMZ3 975 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 TTC6Q86TZ1 520 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
USP11-206ENST00000469080 PYCARDQ9ULZ3 195 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 AOX1Q06278 1338 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 BECN2A8MW95 431 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.13
USP11-206ENST00000469080 SCRN1Q12765 414 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 CUL4AQ13619 759 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 SPECC1Q5M775 1068 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 NBPF5PQ86XG9 351 aaPredicted RBP14.27□□□□□ -0.13
USP11-206ENST00000469080 TTC14Q96N46 770 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 BRMS1Q9HCU9 246 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 ANKIB1Q9P2G1 1089 aa14.27□□□□□ -0.13
USP11-206ENST00000469080 RGPD5Q99666 1765 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 CYP2D7A0A087X1C5 515 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
USP11-206ENST00000469080 TEX35Q5T0J7 233 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
USP11-206ENST00000469080 TRIM5Q9C035 493 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 NUP62CLQ9H1M0 184 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 SUFUQ9UMX1 484 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 NFAT5O94916 1531 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 CYP7A1P22680 504 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
USP11-206ENST00000469080 TEX13AQ9BXU3 409 aaPredicted RBP14.26□□□□□ -0.13
USP11-206ENST00000469080 SPTLC3Q9NUV7 552 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 SH3TC1Q8TE82 1336 aa14.26□□□□□ -0.13
USP11-206ENST00000469080 F8W031 263 aaPredicted RBP14.25□□□□□ -0.13
USP11-206ENST00000469080 LUZP1Q86V48 1076 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 CXorf56Q9H5V9 222 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 CYP19A1P11511 503 aaPredicted RBP14.25□□□□□ -0.13
USP11-206ENST00000469080 SLC5A1P13866 664 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 LRRFIP1Q32MZ4 808 aaKnown RBP14.25□□□□□ -0.13
USP11-206ENST00000469080 C8orf76Q96K31 380 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 SLC4A4Q9Y6R1 1079 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 CCDC73Q6ZRK6 1079 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 PDILTQ8N807 584 aa14.25□□□□□ -0.13
USP11-206ENST00000469080 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
USP11-206ENST00000469080 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
USP11-206ENST00000469080 SLC51AQ86UW1 340 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 ZNF397Q8NF99 534 aaPredicted RBP14.24□□□□□ -0.13
USP11-206ENST00000469080 ZNF609O15014 1411 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 UBE2Q2LH0YL09 131 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 TTC31Q49AM3 519 aaPredicted RBP14.24□□□□□ -0.13
USP11-206ENST00000469080 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 USPL1Q5W0Q7 1092 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 A0A1B0GVL5 298 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
USP11-206ENST00000469080 PDE8AO60658 829 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms