RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 CRKP46108 304 aa18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 TTC39AQ5SRH9 613 aa18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 SPATA5Q8NB90 893 aa18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
TMEM39A-205ENST00000468676 CELF2O95319 508 aaKnown RBP18.14■□□□□ 0.49
TMEM39A-205ENST00000468676 HHIPL2Q6UWX4 724 aa18.14■□□□□ 0.49
TMEM39A-205ENST00000468676 AACSQ86V21 672 aa18.14■□□□□ 0.49
TMEM39A-205ENST00000468676 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
TMEM39A-205ENST00000468676 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
TMEM39A-205ENST00000468676 ADM5C9JUS6 153 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 GRIK5Q16478 980 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 CST9Q5W186 159 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 SLF2Q8IX21 1173 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 ZDHHC15Q96MV8 337 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 CCDC8Q9H0W5 538 aaPredicted RBP18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 DCTPP1Q9H773 170 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 HMG20BQ9P0W2 317 aa18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
TMEM39A-205ENST00000468676 APBB1O00213 710 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 IGSF3O75054 1194 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 HTRA3P83110 453 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 DNAJC5GQ8N7S2 189 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 LRRCC1Q9C099 1032 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 ABCF2Q9UG63 623 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 PCDHB15Q9Y5E8 787 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
TMEM39A-205ENST00000468676 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 PRDX5P30044 214 aa18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 MCAMP43121 646 aa18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 CDCA5Q96FF9 252 aa18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 ABT1Q9ULW3 272 aaKnown RBP18.11■□□□□ 0.49
TMEM39A-205ENST00000468676 NF2P35240 595 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 DZIP1Q86YF9 867 aaKnown RBP18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 C2orf69Q8N8R5 385 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 KLRG1Q96E93 195 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 ZNF70Q9UC06 446 aaPredicted RBP18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 PCDHAC2Q9Y5I4 1007 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 AKAP11Q9UKA4 1901 aa18.1■□□□□ 0.49
TMEM39A-205ENST00000468676 CLRN2A0PK11 232 aa18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 DEFB115Q30KQ5 88 aa18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 FAM163AQ96GL9 167 aaPredicted RBP18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 TDRD3Q9H7E2 651 aaKnown RBP18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 VEZTQ9HBM0 779 aa18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 TMOD2Q9NZR1 351 aa18.09■□□□□ 0.49
TMEM39A-205ENST00000468676 MYH2Q9UKX2 1941 aa18.08■□□□□ 0.49
TMEM39A-205ENST00000468676 RASSF10A6NK89 507 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 TNNI2P48788 182 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 FKBP1BP68106 108 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 GSTO1P78417 241 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 FKBP1CQ5VVH2 108 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 APOBEC3HQ6NTF7 200 aaKnown RBP18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 PI16Q6UXB8 463 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 HHIPL1Q96JK4 782 aa18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 GBA2Q9HCG7 927 aaPredicted RBP18.08■□□□□ 0.48
TMEM39A-205ENST00000468676 CNTNAP1P78357 1384 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 LDHCP07864 332 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 HDAC1Q13547 482 aaPredicted RBP18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 DLK2Q6UY11 383 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 SAPCD2Q86UD0 394 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 LRP2BPQ9P2M1 347 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 DAGLAQ9Y4D2 1042 aa18.07■□□□□ 0.48
TMEM39A-205ENST00000468676 MECOMQ03112 1051 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 DIXDC1Q155Q3 683 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 RAI14Q9P0K7 980 aa18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 SCAF8Q9UPN6 1271 aaKnown RBP18.06■□□□□ 0.48
TMEM39A-205ENST00000468676 GAKO14976 1311 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 AOX1Q06278 1338 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 CYP2E1P05181 493 aaPredicted RBP18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 ECE1P42892 770 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 ZAP70P43403 619 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 RASA3Q14644 834 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 TMED8Q6PL24 325 aaPredicted RBP18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 FAM83AQ86UY5 434 aa18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 MKRN1Q9UHC7 482 aaKnown RBP18.05■□□□□ 0.48
TMEM39A-205ENST00000468676 MAP4K4O95819 1239 aaPredicted RBP18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 HUNKP57058 714 aa18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 PRAMEF18Q5VWM3 479 aa18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 GCC1Q96CN9 775 aa18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 ZBTB47Q9UFB7 747 aaPredicted RBP18.04■□□□□ 0.48
TMEM39A-205ENST00000468676 MROH7-TTC4A0A0A0MT08 1334 aa18.03■□□□□ 0.48
TMEM39A-205ENST00000468676 TCP10L2B9ZVM9 353 aa18.03■□□□□ 0.48
TMEM39A-205ENST00000468676 ATP5JP18859 108 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms