RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TMEM94Q12767 1356 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 MEGF6O75095 1541 aa15.04■□□□□ -0
PDZRN3-205ENST00000466780 TUBB4AP04350 444 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
PDZRN3-205ENST00000466780 TATP17735 454 aaPredicted RBP15.03■□□□□ -0
PDZRN3-205ENST00000466780 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
PDZRN3-205ENST00000466780 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
PDZRN3-205ENST00000466780 GORABQ5T7V8 394 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 CABLES1Q8TDN4 633 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 TMX1Q9H3N1 280 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 TUBE1Q9UJT0 475 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 ZNF142P52746 1687 aaPredicted RBP15.03■□□□□ -0
PDZRN3-205ENST00000466780 EYA2O00167 538 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 PLA2G4AP47712 749 aa15.03■□□□□ -0
PDZRN3-205ENST00000466780 NRDCO43847 1150 aa15.02■□□□□ -0
PDZRN3-205ENST00000466780 ZRANB2O95218 330 aaKnown RBP eCLIP15.02■□□□□ -0
PDZRN3-205ENST00000466780 FGAP02671 866 aa15.02■□□□□ -0
PDZRN3-205ENST00000466780 SLC39A14Q15043 492 aa15.02■□□□□ -0
PDZRN3-205ENST00000466780 REXO1L1PQ8IX06 675 aa15.02■□□□□ -0
PDZRN3-205ENST00000466780 PUS3Q9BZE2 481 aaKnown RBP15.02■□□□□ -0
PDZRN3-205ENST00000466780 SPEF2Q9C093 1822 aa15.02■□□□□ -0
PDZRN3-205ENST00000466780 NBPF26B4DH59 902 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 DHX16O60231 1041 aaKnown RBP15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 GOLGA8FQ08AF8 430 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 GOLGA8DPQ0D2H9 430 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 CHRNA2Q15822 529 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 PTPN21Q16825 1174 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 NBPF14Q5TI25 921 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 NBPF10Q6P3W6 841 aaKnown RBP15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 IFNL2Q8IZJ0 200 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 NBPF15Q8N660 670 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 AIFM3Q96NN9 605 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 GLI3P10071 1580 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 C1orf167Q5SNV9 1468 aa15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 DDX60Q8IY21 1712 aaKnown RBP15.02□□□□□ -0.01
PDZRN3-205ENST00000466780 ERICH4A6NGS2 130 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 ATF3P18847 181 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 UBASH3AP57075 661 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 FKBP4Q02790 459 aaKnown RBP eCLIP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 IMMTQ16891 758 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TIGD1Q96MW7 591 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 HPSEQ9Y251 543 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TMEM232C9JQI7 657 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 CYP27B1O15528 508 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 SYKP43405 635 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 SHC4Q6S5L8 630 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TJP1Q07157 1748 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 A0A0U1RQG5 324 aaPredicted RBP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 CPLX1O14810 134 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TADA3O75528 432 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 FAM193AP78312 1265 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 TTLL7Q6ZT98 887 aa15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 UTP14AQ9BVJ6 771 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-205ENST00000466780 C4AP0C0L4 1744 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 C4BP0C0L5 1744 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 CCDC66A2RUB6 948 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 MYL5Q02045 173 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 PNOCQ13519 176 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 VSTM4Q8IW00 320 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 UBXN4Q92575 508 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 CWC25Q9NXE8 425 aaPredicted RBP15□□□□□ -0.01
PDZRN3-205ENST00000466780 PARP3Q9Y6F1 533 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 CCP110O43303 1012 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 SERPINC1P01008 464 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 ADORA1P30542 326 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 PTPAQ15257 358 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 TMEM139Q8IV31 216 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 DCAF5Q96JK2 942 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
PDZRN3-205ENST00000466780 DENND2AQ9ULE3 1009 aa15□□□□□ -0.01
PDZRN3-205ENST00000466780 SCARF1Q14162 830 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 CFAP100Q494V2 611 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 CARD6Q9BX69 1037 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 PUS7LQ9H0K6 701 aaKnown RBP14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 INTS13Q9NVM9 706 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 KIF1AQ12756 1690 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 CIAO1O76071 339 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 URI1O94763 535 aaPredicted RBP14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 CYP2C19P33261 490 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 CREBRFQ8IUR6 639 aa14.99□□□□□ -0.01
PDZRN3-205ENST00000466780 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 VWA3AA6NCI4 1184 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 CBFA2T2O43439 604 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 FOXP4Q8IVH2 680 aaPredicted RBP14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 FANCLQ9NW38 375 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 ZBTB22O15209 634 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 TMCO3Q6UWJ1 677 aa14.98□□□□□ -0.01
PDZRN3-205ENST00000466780 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms