RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 AOX1Q06278 1338 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 PDS5AQ29RF7 1337 aaKnown RBP15.91■□□□□ 0.14
COL5A1-206ENST00000465877 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
COL5A1-206ENST00000465877 RASSF10A6NK89 507 aa15.9■□□□□ 0.14
COL5A1-206ENST00000465877 CRKP46108 304 aa15.9■□□□□ 0.14
COL5A1-206ENST00000465877 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL5A1-206ENST00000465877 SUGT1Q9Y2Z0 365 aa15.9■□□□□ 0.14
COL5A1-206ENST00000465877 TLL2Q9Y6L7 1015 aa15.9■□□□□ 0.14
COL5A1-206ENST00000465877 SSC5DA1L4H1 1573 aa15.9■□□□□ 0.14
COL5A1-206ENST00000465877 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 MYO1BO43795 1136 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 PRDX5P30044 214 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 SIRT2Q8IXJ6 389 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 MYH7P12883 1935 aa15.89■□□□□ 0.13
COL5A1-206ENST00000465877 ARID4AP29374 1257 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-206ENST00000465877 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
COL5A1-206ENST00000465877 TEKT1Q969V4 418 aa15.88■□□□□ 0.13
COL5A1-206ENST00000465877 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-206ENST00000465877 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
COL5A1-206ENST00000465877 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
COL5A1-206ENST00000465877 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
COL5A1-206ENST00000465877 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
COL5A1-206ENST00000465877 SAPCD2Q86UD0 394 aa15.87■□□□□ 0.13
COL5A1-206ENST00000465877 ZGPATQ8N5A5 531 aaKnown RBP15.87■□□□□ 0.13
COL5A1-206ENST00000465877 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
COL5A1-206ENST00000465877 VEZTQ9HBM0 779 aa15.87■□□□□ 0.13
COL5A1-206ENST00000465877 GBA2Q9HCG7 927 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-206ENST00000465877 TLR7Q9NYK1 1049 aaKnown RBP15.87■□□□□ 0.13
COL5A1-206ENST00000465877 DBNLQ9UJU6 430 aaKnown RBP15.87■□□□□ 0.13
COL5A1-206ENST00000465877 AK9Q5TCS8 1911 aa15.86■□□□□ 0.13
COL5A1-206ENST00000465877 LDHBP07195 334 aaKnown RBP15.86■□□□□ 0.13
COL5A1-206ENST00000465877 MCAMP43121 646 aa15.86■□□□□ 0.13
COL5A1-206ENST00000465877 TTC39AQ5SRH9 613 aa15.86■□□□□ 0.13
COL5A1-206ENST00000465877 PI16Q6UXB8 463 aa15.86■□□□□ 0.13
COL5A1-206ENST00000465877 HMG20BQ9P0W2 317 aa15.86■□□□□ 0.13
COL5A1-206ENST00000465877 UQCRFS1P1P0C7P4 283 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 VEGFBP49765 207 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 DIXDC1Q155Q3 683 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-206ENST00000465877 SPATA5Q8NB90 893 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 EAF2Q96CJ1 260 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-206ENST00000465877 ZDHHC15Q96MV8 337 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 TDRD3Q9H7E2 651 aaKnown RBP15.85■□□□□ 0.13
COL5A1-206ENST00000465877 PPP2R3BQ9Y5P8 575 aa15.85■□□□□ 0.13
COL5A1-206ENST00000465877 HUNKP57058 714 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 TNFAIP1Q13829 316 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 PRAMEF18Q5VWM3 479 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 HHIPL2Q6UWX4 724 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 C2orf69Q8N8R5 385 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 RHPN1Q8TCX5 695 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 KIF1BPQ96EK5 621 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 HHIPL1Q96JK4 782 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 DEFB129Q9H1M3 183 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 IL1RAPL2Q9NP60 686 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 ZNF70Q9UC06 446 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-206ENST00000465877 ABCF2Q9UG63 623 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 DAGLAQ9Y4D2 1042 aa15.84■□□□□ 0.13
COL5A1-206ENST00000465877 APBB1O00213 710 aa15.83■□□□□ 0.12
COL5A1-206ENST00000465877 CYP4F22Q6NT55 531 aa15.83■□□□□ 0.12
COL5A1-206ENST00000465877 AACSQ86V21 672 aa15.83■□□□□ 0.12
COL5A1-206ENST00000465877 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.12
COL5A1-206ENST00000465877 CAPNS2Q96L46 248 aa15.83■□□□□ 0.12
COL5A1-206ENST00000465877 CCDC8Q9H0W5 538 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-206ENST00000465877 RPAP1Q9BWH6 1393 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-206ENST00000465877 NF2P35240 595 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 ECE1P42892 770 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 FKBP1BP68106 108 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 GRM1Q13255 1194 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 APOBEC3HQ6NTF7 200 aaKnown RBP15.82■□□□□ 0.12
COL5A1-206ENST00000465877 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-206ENST00000465877 MRIQ9BWK5 157 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 TMOD2Q9NZR1 351 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 GAKO14976 1311 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 WDR33Q9C0J8 1336 aaKnown RBP15.82■□□□□ 0.12
COL5A1-206ENST00000465877 RFX7Q2KHR2 1363 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
COL5A1-206ENST00000465877 MROH7-TTC4A0A0A0MT08 1334 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 CACNB3P54284 484 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 RASA3Q14644 834 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 DDX60LQ5H9U9 1706 aaKnown RBP15.81■□□□□ 0.12
COL5A1-206ENST00000465877 SPTY2D1Q68D10 685 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-206ENST00000465877 ERICH6Q7L0X2 663 aa15.81■□□□□ 0.12
COL5A1-206ENST00000465877 SIPA1L1O43166 1804 aa15.8■□□□□ 0.12
COL5A1-206ENST00000465877 TNNI2P48788 182 aa15.8■□□□□ 0.12
COL5A1-206ENST00000465877 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
COL5A1-206ENST00000465877 SNRKQ9NRH2 765 aa15.8■□□□□ 0.12
COL5A1-206ENST00000465877 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
COL5A1-206ENST00000465877 MECOMQ03112 1051 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 TTLL12Q14166 644 aaPredicted RBP15.79■□□□□ 0.12
COL5A1-206ENST00000465877 RGMBQ6NW40 437 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 TBC1D9Q6ZT07 1266 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 MOB2Q70IA6 237 aa15.79■□□□□ 0.12
COL5A1-206ENST00000465877 CDAN1Q8IWY9 1227 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms