RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 HSPD1P10809 573 aaKnown RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 CAPN2P17655 700 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 UBASH3AP57075 661 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 GPS2Q13227 327 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 CC2D1AQ6P1N0 951 aaPredicted RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 CARD6Q9BX69 1037 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 PAG1Q9NWQ8 432 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 HPSEQ9Y251 543 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 MAST3O60307 1309 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 WDR19Q8NEZ3 1342 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 AFDNP55196 1824 aaKnown RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 VWA3AA6NCI4 1184 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 BIN1O00499 593 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 FANCGO15287 622 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 MAP3K9P80192 1104 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 JAKMIP3Q5VZ66 844 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 RSRC2Q7L4I2 434 aaKnown RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 TMEM139Q8IV31 216 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 XAGE3Q8WTP9 111 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 LRRC59Q96AG4 307 aaKnown RBP8.42□□□□□ -1.06
USP48-206ENST00000464577 PSD3Q9NYI0 1048 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 PPP2R2CQ9Y2T4 447 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
USP48-206ENST00000464577 MROH7-TTC4A0A0A0MT08 1334 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 ARFGEF2Q9Y6D5 1785 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 RNF113AO15541 343 aaKnown RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 PPP6R2O75170 966 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SERPINC1P01008 464 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 TOP1P11387 765 aaKnown RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 ATP1A3P13637 1013 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 OAS2P29728 719 aaKnown RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 KIF23Q02241 960 aaPredicted RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 TBX2Q13207 712 aaPredicted RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 SLC39A14Q15043 492 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 ELOA2Q8IYF1 753 aaPredicted RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP48-206ENST00000464577 RABGGTAQ92696 567 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 NAP1L2Q9ULW6 460 aaPredicted RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 MRFAP1Q9Y605 127 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 C4AP0C0L4 1744 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 C4BP0C0L5 1744 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 MAP3K15Q6ZN16 1313 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 GOLIM4O00461 696 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SASH3O75995 380 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SEC31AO94979 1220 aaKnown RBP8.41□□□□□ -1.06
USP48-206ENST00000464577 CASQ1P31415 396 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SYKP43405 635 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 CASP7P55210 303 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 RAD51AP2Q09MP3 1159 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 COPS6Q7L5N1 327 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 LRP10Q7Z4F1 713 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 DPF2Q92785 391 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 FMNL2Q96PY5 1086 aa8.41□□□□□ -1.06
USP48-206ENST00000464577 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 KIF1AQ12756 1690 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 KIF28PB7ZC32 967 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 POLR3GO15318 223 aaPredicted RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 STX10O60499 249 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 KCNA6P17658 529 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 EVX2Q03828 476 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 SMC1AQ14683 1233 aaKnown RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 BRD3Q15059 726 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 CFAP100Q494V2 611 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 OTUD7BQ6GQQ9 843 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 ZNF790Q6PG37 636 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 ANKRD13DQ6ZTN6 518 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 MB21D2Q8IYB1 491 aaPredicted RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 MSL3Q8N5Y2 521 aaKnown RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 EXOC4Q96A65 974 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 UTP14AQ9BVJ6 771 aaKnown RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 ARFGAP3Q9NP61 516 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.06
USP48-206ENST00000464577 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
USP48-206ENST00000464577 NWD2Q9ULI1 1742 aa8.4□□□□□ -1.07
USP48-206ENST00000464577 A0A0G2JLW4 131 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 KLF18A0A0U1RQI7 1052 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 GOLGA8BA8MQT2 603 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 WDHD1O75717 1129 aaPredicted RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 RESP18Q5W5W9 173 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 UBE3BQ7Z3V4 1068 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 IQUBQ8NA54 791 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 NEK11Q8NG66 645 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 AK7Q96M32 723 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 BAG1Q99933 345 aaPredicted RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 C19orf44Q9H6X5 657 aa8.39□□□□□ -1.07
USP48-206ENST00000464577 CWC15Q9P013 229 aaKnown RBP8.39□□□□□ -1.07
USP48-206ENST00000464577 CPDO75976 1380 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms