RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
SQSTM1-205ENST00000464493 MAST3O60307 1309 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 PASKQ96RG2 1323 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 CRKP46108 304 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 USP48Q86UV5 1035 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 GLIS2Q9BZE0 524 aaPredicted RBP17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 ABCF2Q9UG63 623 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 PCDHAC2Q9Y5I4 1007 aa17.77■□□□□ 0.44
SQSTM1-205ENST00000464493 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 PRDX5P30044 214 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 APLP1P51693 650 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 SPTY2D1Q68D10 685 aaPredicted RBP17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 KRT26Q7Z3Y9 468 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 SULF1Q8IWU6 871 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 TEKT1Q969V4 418 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 SNRKQ9NRH2 765 aa17.76■□□□□ 0.43
SQSTM1-205ENST00000464493 PITPNM2Q9BZ72 1349 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 TRAF5O00463 557 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 MYO1BO43795 1136 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 HHIPL2Q6UWX4 724 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
SQSTM1-205ENST00000464493 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
SQSTM1-205ENST00000464493 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
SQSTM1-205ENST00000464493 ZDHHC15Q96MV8 337 aa17.74■□□□□ 0.43
SQSTM1-205ENST00000464493 ADM5C9JUS6 153 aa17.73■□□□□ 0.43
SQSTM1-205ENST00000464493 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
SQSTM1-205ENST00000464493 ZAP70P43403 619 aa17.73■□□□□ 0.43
SQSTM1-205ENST00000464493 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.432e-7■□□□□ 9.8
SQSTM1-205ENST00000464493 DZIP1Q86YF9 867 aaKnown RBP17.73■□□□□ 0.43
SQSTM1-205ENST00000464493 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 IGHDP01880 384 aa17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 DIXDC1Q155Q3 683 aa17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 APOBEC3FQ8IUX4 373 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 SCAF8Q9UPN6 1271 aaKnown RBP17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 AOX1Q06278 1338 aa17.72■□□□□ 0.43
SQSTM1-205ENST00000464493 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 ANKRD45Q5TZF3 282 aa17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 APOBEC3HQ6NTF7 200 aaKnown RBP17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 DLK2Q6UY11 383 aa17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 SLF2Q8IX21 1173 aa17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
SQSTM1-205ENST00000464493 TRPM7Q96QT4 1865 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 TMEM88BA6NKF7 163 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 CENPBP07199 599 aaPredicted RBP17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 ATP5JP18859 108 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 MECOMQ03112 1051 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 CST9Q5W186 159 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 VEZTQ9HBM0 779 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 DAGLAQ9Y4D2 1042 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 NDUFB9Q9Y6M9 179 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 MYH2Q9UKX2 1941 aa17.7■□□□□ 0.42
SQSTM1-205ENST00000464493 CELF2O95319 508 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 GSTO1P78417 241 aa17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 SMC5Q8IY18 1101 aa17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 FAM163AQ96GL9 167 aaPredicted RBP17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 PIH1D3Q9NQM4 214 aaKnown RBP17.69■□□□□ 0.42
SQSTM1-205ENST00000464493 IGSF3O75054 1194 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 LDHCP07864 332 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 HTRA3P83110 453 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 CDCA5Q96FF9 252 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 GPATCH3Q96I76 525 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 BOLA2Q9H3K6 86 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 ANTXR1Q9H6X2 564 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 ECHDC1Q9NTX5 307 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 GAKO14976 1311 aa17.68■□□□□ 0.42
SQSTM1-205ENST00000464493 TNFAIP1Q13829 316 aa17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 TTF1Q15361 905 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 PRAMEF18Q5VWM3 479 aa17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 B4GALNT3Q6L9W6 998 aa17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 MROH7-TTC4A0A0A0MT08 1334 aa17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 MYO5AQ9Y4I1 1855 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-205ENST00000464493 CEP350Q5VT06 3117 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 TCP10L2B9ZVM9 353 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 IDH1O75874 414 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 RASA3Q14644 834 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 NAA16Q6N069 864 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 CDC42EP5Q6NZY7 148 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 HAUS7Q99871 368 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 USP40Q9NVE5 1235 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 PPP2R3BQ9Y5P8 575 aa17.66■□□□□ 0.42
SQSTM1-205ENST00000464493 GPR75-ASB3A0A0A6YYF3 556 aa17.65■□□□□ 0.42
SQSTM1-205ENST00000464493 GOLIM4O00461 696 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms