RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MKNK2Q9HBH9 465 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 RBM28Q9NW13 759 aaKnown RBP17.84■□□□□ 0.45
SMC4-204ENST00000462787 CHST3Q7LGC8 479 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 IFT74Q96LB3 600 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 USP5P45974 858 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 CCDC77Q9BR77 488 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 ZSWIM6Q9HCJ5 1215 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 PHLPP2Q6ZVD8 1323 aa17.84■□□□□ 0.45
SMC4-204ENST00000462787 NCBP1Q09161 790 aaKnown RBP17.83■□□□□ 0.45
SMC4-204ENST00000462787 ATP2B3Q16720 1220 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 FMNL3Q8IVF7 1028 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 CTNNBL1Q8WYA6 563 aaPredicted RBP17.83■□□□□ 0.45
SMC4-204ENST00000462787 PLVAPQ9BX97 442 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 ACEP12821 1306 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 PTPRTO14522 1441 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 STARD3NLO95772 234 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 CETN1Q12798 172 aa17.83■□□□□ 0.45
SMC4-204ENST00000462787 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
SMC4-204ENST00000462787 HOOK3Q86VS8 718 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 TMEM87AQ8NBN3 555 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 JAKMIP2Q96AA8 810 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.44
SMC4-204ENST00000462787 MACROD2A1Z1Q3 448 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 KIAA0232Q92628 1395 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 CCT6AP40227 531 aaKnown RBP17.82■□□□□ 0.44
SMC4-204ENST00000462787 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 RUFY4Q6ZNE9 571 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 ATP5J2-PTCD1G3V325 749 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
SMC4-204ENST00000462787 RBM6P78332 1123 aaKnown RBP17.82■□□□□ 0.44
SMC4-204ENST00000462787 SYNRGQ9UMZ2 1314 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 A0A1W2PRG0 241 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 JAK2O60674 1132 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 IL13P35225 146 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 ZNF76P36508 570 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 PPP1R2P41236 205 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 SLFNL1Q499Z3 407 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 ESR2Q92731 530 aa17.82■□□□□ 0.44
SMC4-204ENST00000462787 CAVIN4Q5BKX8 364 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 CABS1Q96KC9 395 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 ASIC1P78348 528 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 LRRC45Q96CN5 670 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 FAM227BQ96M60 508 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 KRT2P35908 639 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 LDHAL6AQ6ZMR3 332 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 NUP58Q9BVL2 599 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
SMC4-204ENST00000462787 BUB1BO60566 1050 aaPredicted RBP17.81■□□□□ 0.44
SMC4-204ENST00000462787 SND1Q7KZF4 910 aaKnown RBP eCLIP17.81■□□□□ 0.446e-9■■■■■ 32.8
SMC4-204ENST00000462787 GOLGA8KD6RF30 607 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 HNRNPH2P55795 449 aaKnown RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 CAPN7Q9Y6W3 813 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 HPDP32754 393 aaPredicted RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 PAK2Q13177 524 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 SECISBP2LQ93073 1101 aaKnown RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 PDE11AQ9HCR9 933 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 NPATQ14207 1427 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 SNRPA1P09661 255 aaKnown RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 CLCN6P51797 869 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 BANK1Q8NDB2 785 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 PLCH2O75038 1416 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 MTRF1LQ9UGC7 380 aaKnown RBP17.8■□□□□ 0.44
SMC4-204ENST00000462787 CEP83Q9Y592 693 aa17.8■□□□□ 0.44
SMC4-204ENST00000462787 SETDB1Q15047 1291 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 LMNTD2Q8IXW0 634 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 NSFL1CQ9UNZ2 370 aaKnown RBP17.79■□□□□ 0.44
SMC4-204ENST00000462787 CTNND2Q9UQB3 1225 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 KIF21AQ7Z4S6 1674 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 KRT9P35527 623 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 ATP11AP98196 1134 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 TOM1L2Q6ZVM7 507 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 CCDC26Q8TAB7 109 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 UBLCP1Q8WVY7 318 aaPredicted RBP17.79■□□□□ 0.44
SMC4-204ENST00000462787 VPS16Q9H269 839 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 STX10O60499 249 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 TRIM7Q9C029 511 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 GNGT1P63211 74 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 LONRF2Q1L5Z9 754 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 SAR1BQ9Y6B6 198 aa17.79■□□□□ 0.44
SMC4-204ENST00000462787 RTL9Q8NET4 1388 aa17.78■□□□□ 0.44
SMC4-204ENST00000462787 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
SMC4-204ENST00000462787 CALM1P0DP23 149 aa17.78■□□□□ 0.44
SMC4-204ENST00000462787 CALM2P0DP24 149 aa17.78■□□□□ 0.44
SMC4-204ENST00000462787 CALM3P0DP25 149 aa17.78■□□□□ 0.44
SMC4-204ENST00000462787 CALML3P27482 149 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms