RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF202O95125 648 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CTDNEP1O95476 244 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 APPP05067 770 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 PCCAP05165 728 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 TOP1P11387 765 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 PFKFB1P16118 471 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 XBP1P17861 261 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CDK11BP21127 795 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ADD1P35611 737 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 IARSP41252 1262 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 PIP4K2AP48426 406 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 NDUFA8P51970 172 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 UBASH3AP57075 661 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCZ1BP86790 482 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCZ1P86791 482 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 FOXO4P98177 505 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 FANCCQ00597 558 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 KIF23Q02241 960 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 SSRP1Q08945 709 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 GPS2Q13227 327 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 IFIT5Q13325 482 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 SLC39A14Q15043 492 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATP2B3Q16720 1220 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC144BQ3MJ40 725 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CFAP100Q494V2 611 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 METTL24Q5JXM2 366 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC102BQ68D86 513 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 KANK3Q6NY19 840 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 TMCO3Q6UWJ1 677 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATG9AQ7Z3C6 839 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC144CPQ8IYA2 1237 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 MB21D2Q8IYB1 491 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 FBXO18Q8NFZ0 1043 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 UBXN4Q92575 508 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 JARID2Q92833 1246 aaPredicted RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 FBXW7Q969H0 707 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 XAGE2Q96GT9 111 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 PPP1R13BQ96KQ4 1090 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ALG1Q9BT22 464 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 NACAP1Q9BZK3 213 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 KRT23Q9C075 422 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 XPO4Q9C0E2 1151 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 NCOA5Q9HCD5 579 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 IFNKQ9P0W0 207 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 DNAI1Q9UI46 699 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 DDX41Q9UJV9 622 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ANGEL1Q9UNK9 670 aaKnown RBP3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 AXIN2Q9Y2T1 843 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 STK36Q9NRP7 1315 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 TMEM94Q12767 1356 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ATRNO75882 1429 aa3.84□□□□□ -1.79
HMGN1P18-201ENST00000457642 ADAMTSL3P82987 1691 aa3.84□□□□□ -1.8
HMGN1P18-201ENST00000457642 TJP1Q07157 1748 aa3.84□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ANKRD18BA2A2Z9 1011 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 FAM177BA6PVY3 158 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 POTEB2H3BUK9 544 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 BIN1O00499 593 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CYP27B1O15528 508 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ARHGAP6O43182 974 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 GPAA1O43292 621 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ATP8B1O43520 1251 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 DTNBO60941 627 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 STARD3NLO95772 234 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 BMP15O95972 392 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 POLR3DP05423 398 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZSCAN20P17040 1043 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 GNAT2P19087 354 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 HAND2P61296 217 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TIMM10P62072 90 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TUBB4BP68371 445 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 AKAP17AQ02040 695 aaKnown RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TUBB2AQ13885 445 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 UBE3CQ15386 1083 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ELF2Q15723 593 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 DPCR1Q3MIW9 517 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 FILIP1LQ4L180 1135 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 LRRC24Q50LG9 513 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CT47A1Q5JQC4 288 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 JAKMIP3Q5VZ66 844 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TOM1L2Q6ZVM7 507 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 LRP10Q7Z4F1 713 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CADPS2Q86UW7 1296 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ELOA2Q8IYF1 753 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TMTC2Q8N394 836 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 KRI1Q8N9T8 703 aaKnown RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TRIML1Q8N9V2 468 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 CNNM3Q8NE01 707 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ANKRD20A12PQ8NF67 263 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 ZCRB1Q8TBF4 217 aaKnown RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 SMARCE1Q969G3 411 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 AIDAQ96BJ3 306 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 RBM33Q96EV2 1170 aaKnown RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 MPHOSPH8Q99549 860 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 PYM1Q9BRP8 204 aaKnown RBP3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 MTA3Q9BTC8 594 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 TUBB2BQ9BVA1 445 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 PLA2G12BQ9BX93 195 aa3.83□□□□□ -1.8
HMGN1P18-201ENST00000457642 FTOQ9C0B1 505 aaKnown RBP eCLIP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms