RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TSPYL4Q9UJ04 414 aa21.34■■□□□ 1.01
PTPA-223ENST00000452489 NBPF20Q3BBV1 942 aa21.34■■□□□ 1.01
PTPA-223ENST00000452489 NME9Q86XW9 330 aa21.34■■□□□ 1.01
PTPA-223ENST00000452489 CDK19Q9BWU1 502 aa21.34■■□□□ 1.01
PTPA-223ENST00000452489 SAMM50Q9Y512 469 aa21.34■■□□□ 1.01
PTPA-223ENST00000452489 ADALQ6DHV7 355 aa21.33■■□□□ 1.01
PTPA-223ENST00000452489 BCAS4Q8TDM0 211 aa21.33■■□□□ 1.01
PTPA-223ENST00000452489 TBC1D22AQ8WUA7 517 aa21.33■■□□□ 1.01
PTPA-223ENST00000452489 GDAP1L1Q96MZ0 367 aa21.33■■□□□ 1.01
PTPA-223ENST00000452489 LRRC2Q9BYS8 371 aa21.33■■□□□ 1.01
PTPA-223ENST00000452489 A0A0D9SFI3 127 aa21.33■■□□□ 1
PTPA-223ENST00000452489 NAA16Q6N069 864 aaPredicted RBP21.33■■□□□ 1
PTPA-223ENST00000452489 VEZTQ9HBM0 779 aa21.33■■□□□ 1
PTPA-223ENST00000452489 USP42Q9H9J4 1324 aaKnown RBP21.33■■□□□ 1
PTPA-223ENST00000452489 CRB1P82279 1406 aa21.32■■□□□ 1
PTPA-223ENST00000452489 FNTAP49354 379 aa21.32■■□□□ 1
PTPA-223ENST00000452489 DDR1Q08345 913 aa21.32■■□□□ 1
PTPA-223ENST00000452489 TBX2Q13207 712 aaPredicted RBP21.32■■□□□ 1
PTPA-223ENST00000452489 KIF4BQ2VIQ3 1234 aa21.32■■□□□ 1
PTPA-223ENST00000452489 Q6ZUG5 572 aa21.32■■□□□ 1
PTPA-223ENST00000452489 TACO1Q9BSH4 297 aaKnown RBP21.32■■□□□ 1
PTPA-223ENST00000452489 HPCAL4Q9UM19 191 aa21.32■■□□□ 1
PTPA-223ENST00000452489 ABCC6O95255 1503 aa21.32■■□□□ 1
PTPA-223ENST00000452489 H0YHG0 523 aa21.32■■□□□ 1
PTPA-223ENST00000452489 MYL5Q02045 173 aa21.32■■□□□ 1
PTPA-223ENST00000452489 C11orf91Q3C1V1 193 aa21.32■■□□□ 1
PTPA-223ENST00000452489 JMYQ8N9B5 988 aa21.32■■□□□ 1
PTPA-223ENST00000452489 MYH15Q9Y2K3 1946 aa21.32■■□□□ 1
PTPA-223ENST00000452489 SOWAHDA6NJG2 315 aa21.31■■□□□ 1
PTPA-223ENST00000452489 INHBEP58166 350 aa21.31■■□□□ 1
PTPA-223ENST00000452489 ZNF569Q5MCW4 686 aa21.31■■□□□ 1
PTPA-223ENST00000452489 ARHGEF10O15013 1369 aa21.31■■□□□ 1
PTPA-223ENST00000452489 ZC3H4Q9UPT8 1303 aaKnown RBP21.31■■□□□ 1
PTPA-223ENST00000452489 ZNF202O95125 648 aa21.31■■□□□ 1
PTPA-223ENST00000452489 NF2P35240 595 aa21.31■■□□□ 1
PTPA-223ENST00000452489 OS9Q13438 667 aaPredicted RBP21.31■■□□□ 1
PTPA-223ENST00000452489 SMARCC2Q8TAQ2 1214 aa21.31■■□□□ 1
PTPA-223ENST00000452489 RDXP35241 583 aaKnown RBP21.3■■□□□ 1
PTPA-223ENST00000452489 GGCXP38435 758 aa21.3■■□□□ 1
PTPA-223ENST00000452489 ECHDC1Q9NTX5 307 aa21.3■■□□□ 1
PTPA-223ENST00000452489 XRN1Q8IZH2 1706 aaKnown RBP21.3■■□□□ 1
PTPA-223ENST00000452489 CTAGE15A4D2H0 777 aa21.3■■□□□ 1
PTPA-223ENST00000452489 CCDC175P0C221 793 aa21.3■■□□□ 1
PTPA-223ENST00000452489 CTAGE8P0CG41 777 aa21.3■■□□□ 1
PTPA-223ENST00000452489 CTAGE6Q86UF2 777 aa21.3■■□□□ 1
PTPA-223ENST00000452489 CTAGE4Q8IX94 777 aa21.3■■□□□ 1
PTPA-223ENST00000452489 NSUN7Q8NE18 718 aaKnown RBP21.3■■□□□ 1
PTPA-223ENST00000452489 EVI5LQ96CN4 794 aa21.3■■□□□ 1
PTPA-223ENST00000452489 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.3■■□□□ 1
PTPA-223ENST00000452489 VIPAS39Q9H9C1 493 aa21.3■■□□□ 1
PTPA-223ENST00000452489 NUTM2FA1L443 756 aa21.29■■□□□ 1
PTPA-223ENST00000452489 GCFC2P16383 781 aaKnown RBP21.29■■□□□ 1
PTPA-223ENST00000452489 NUTM2GQ5VZR2 741 aa21.29■■□□□ 1
PTPA-223ENST00000452489 CLIC4Q9Y696 253 aa21.29■■□□□ 1
PTPA-223ENST00000452489 ATP7AQ04656 1500 aa21.29■■□□□ 1
PTPA-223ENST00000452489 A0A1W2PQ27 194 aa21.29■■□□□ 1
PTPA-223ENST00000452489 A0A1W2PQ64 194 aa21.29■■□□□ 1
PTPA-223ENST00000452489 A0A1W2PQD8 194 aa21.29■■□□□ 1
PTPA-223ENST00000452489 KIF5CO60282 957 aa21.29■■□□□ 1
PTPA-223ENST00000452489 CTDNEP1O95476 244 aa21.29■■□□□ 1
PTPA-223ENST00000452489 SF3A1Q15459 793 aaKnown RBP21.29■■□□□ 1
PTPA-223ENST00000452489 PREPLQ4J6C6 727 aaPredicted RBP21.29■■□□□ 1
PTPA-223ENST00000452489 FAM76AQ8TAV0 307 aa21.29■■□□□ 1
PTPA-223ENST00000452489 XAGE2Q96GT9 111 aa21.29■■□□□ 1
PTPA-223ENST00000452489 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
PTPA-223ENST00000452489 PTPDC1A2A3K4 754 aa21.28■■□□□ 1
PTPA-223ENST00000452489 ZNF589Q86UQ0 364 aaPredicted RBP21.28■■□□□ 1
PTPA-223ENST00000452489 TEX11Q8IYF3 940 aa21.28■■□□□ 1
PTPA-223ENST00000452489 GRIN2DO15399 1336 aa21.28■■□□□ 1
PTPA-223ENST00000452489 SHTN1A0MZ66 631 aa21.28■■□□□ 1
PTPA-223ENST00000452489 CHUKO15111 745 aa21.28■■□□□ 1
PTPA-223ENST00000452489 FOXO3O43524 673 aa21.28■■□□□ 1
PTPA-223ENST00000452489 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
PTPA-223ENST00000452489 PFKFB2O60825 505 aa21.27■■□□□ 1
PTPA-223ENST00000452489 SLC35F6Q8N357 371 aa21.27■■□□□ 1
PTPA-223ENST00000452489 PTPRMP28827 1452 aa21.27■■□□□ 1
PTPA-223ENST00000452489 KIF3CO14782 793 aa21.27■■□□□ 1
PTPA-223ENST00000452489 STK38Q15208 465 aa21.27■■□□□ 1
PTPA-223ENST00000452489 WDR93Q6P2C0 686 aa21.27■■□□□ 1
PTPA-223ENST00000452489 LINC00301Q8NCQ3 95 aa21.27■■□□□ 1
PTPA-223ENST00000452489 FRMD3A2A2Y4 597 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 CTAGE9A4FU28 777 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
PTPA-223ENST00000452489 STIM1Q13586 685 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 ATL3Q6DD88 541 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 RAD9BQ6WBX8 426 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 CDC5LQ99459 802 aaKnown RBP21.26■□□□□ 0.99
PTPA-223ENST00000452489 ADGRG1Q9Y653 693 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 GOLGA6CA6NDK9 693 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 AGPSO00116 658 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 EIF3HO15372 352 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTPA-223ENST00000452489 ABL1P00519 1130 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 GOLGA6DP0CG33 693 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 GNGT1P63211 74 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 SARNPP82979 210 aaKnown RBP21.26■□□□□ 0.99
PTPA-223ENST00000452489 ACTN3Q08043 901 aaPredicted RBP21.26■□□□□ 0.99
PTPA-223ENST00000452489 CLASRPQ8N2M8 674 aaKnown RBP21.26■□□□□ 0.99
PTPA-223ENST00000452489 NEK1Q96PY6 1258 aa21.26■□□□□ 0.99
PTPA-223ENST00000452489 CAPS2Q9BXY5 557 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms