RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 MOB2Q70IA6 237 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 NEUROD6Q96NK8 337 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
HDAC4-203ENST00000445704 ZBTB40Q9NUA8 1239 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 ZBTB22O15209 634 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 AOC2O75106 756 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 HDLBPQ00341 1268 aaKnown RBP23.2■■□□□ 1.3
HDAC4-203ENST00000445704 SPDYE2Q495Y8 402 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 DEFB129Q9H1M3 183 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 VEZTQ9HBM0 779 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 ZNF70Q9UC06 446 aaPredicted RBP23.2■■□□□ 1.3
HDAC4-203ENST00000445704 DENND2AQ9ULE3 1009 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 SUGT1Q9Y2Z0 365 aa23.2■■□□□ 1.3
HDAC4-203ENST00000445704 SALL1Q9NSC2 1324 aa23.19■■□□□ 1.3
HDAC4-203ENST00000445704 PRDX5P30044 214 aa23.19■■□□□ 1.3
HDAC4-203ENST00000445704 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
HDAC4-203ENST00000445704 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
HDAC4-203ENST00000445704 TEKT1Q969V4 418 aa23.19■■□□□ 1.3
HDAC4-203ENST00000445704 SSC5DA1L4H1 1573 aa23.18■■□□□ 1.3
HDAC4-203ENST00000445704 MAST3O60307 1309 aa23.18■■□□□ 1.3
HDAC4-203ENST00000445704 RGMBQ6NW40 437 aa23.18■■□□□ 1.3
HDAC4-203ENST00000445704 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
HDAC4-203ENST00000445704 GPR108Q9NPR9 543 aa23.18■■□□□ 1.3
HDAC4-203ENST00000445704 FKBP1BP68106 108 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 ZDHHC15Q96MV8 337 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
HDAC4-203ENST00000445704 PDS5AQ29RF7 1337 aaKnown RBP23.16■■□□□ 1.3
HDAC4-203ENST00000445704 PCNTO95613 3336 aa23.16■■□□□ 1.3
HDAC4-203ENST00000445704 FAM155AB1AL88 458 aaPredicted RBP23.16■■□□□ 1.3
HDAC4-203ENST00000445704 WBP1LQ9NX94 342 aa23.16■■□□□ 1.3
HDAC4-203ENST00000445704 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
HDAC4-203ENST00000445704 PPP2R3BQ9Y5P8 575 aa23.16■■□□□ 1.3
HDAC4-203ENST00000445704 UBE2Q2LH0YL09 131 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 LDHBP07195 334 aaKnown RBP23.15■■□□□ 1.3
HDAC4-203ENST00000445704 NF2P35240 595 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 RASA3Q14644 834 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 DIXDC1Q155Q3 683 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 GORABQ5T7V8 394 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 APOBEC3HQ6NTF7 200 aaKnown RBP23.15■■□□□ 1.3
HDAC4-203ENST00000445704 PI16Q6UXB8 463 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 ZIC5Q96T25 663 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 DBNDD2Q9BQY9 259 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 FZD1Q9UP38 647 aa23.15■■□□□ 1.3
HDAC4-203ENST00000445704 FOXN1O15353 648 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 ARID4AP29374 1257 aaPredicted RBP23.14■■□□□ 1.29
HDAC4-203ENST00000445704 MAP2K2P36507 400 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 ZNF157P51786 506 aaPredicted RBP23.14■■□□□ 1.29
HDAC4-203ENST00000445704 CACNB3P54284 484 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 PRKG1Q13976 671 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 HHIPL2Q6UWX4 724 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 RPAP2Q8IXW5 612 aaPredicted RBP23.14■■□□□ 1.29
HDAC4-203ENST00000445704 HMG20BQ9P0W2 317 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 DAGLAQ9Y4D2 1042 aa23.14■■□□□ 1.29
HDAC4-203ENST00000445704 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
HDAC4-203ENST00000445704 TTLL12Q14166 644 aaPredicted RBP23.13■■□□□ 1.29
HDAC4-203ENST00000445704 NBPF12Q5TAG4 269 aaPredicted RBP23.13■■□□□ 1.29
HDAC4-203ENST00000445704 CDAN1Q8IWY9 1227 aa23.13■■□□□ 1.29
HDAC4-203ENST00000445704 TLR7Q9NYK1 1049 aaKnown RBP23.13■■□□□ 1.29
HDAC4-203ENST00000445704 SLC10A3P09131 477 aa23.12■■□□□ 1.29
HDAC4-203ENST00000445704 MCAMP43121 646 aa23.12■■□□□ 1.29
HDAC4-203ENST00000445704 RASAL3Q86YV0 1011 aa23.12■■□□□ 1.29
HDAC4-203ENST00000445704 SPATA5Q8NB90 893 aa23.12■■□□□ 1.29
HDAC4-203ENST00000445704 CHMP4BQ9H444 224 aaKnown RBP23.12■■□□□ 1.29
HDAC4-203ENST00000445704 ABCF2Q9UG63 623 aa23.12■■□□□ 1.29
HDAC4-203ENST00000445704 MAP2K1Q02750 393 aaPredicted RBP23.11■■□□□ 1.29
HDAC4-203ENST00000445704 NOGQ13253 232 aa23.11■■□□□ 1.29
HDAC4-203ENST00000445704 TNFAIP1Q13829 316 aa23.11■■□□□ 1.29
HDAC4-203ENST00000445704 ZGPATQ8N5A5 531 aaKnown RBP23.11■■□□□ 1.29
HDAC4-203ENST00000445704 CCDC102AQ96A19 550 aa23.11■■□□□ 1.29
HDAC4-203ENST00000445704 EAF2Q96CJ1 260 aaPredicted RBP23.11■■□□□ 1.29
HDAC4-203ENST00000445704 TEPSINQ96N21 525 aa23.11■■□□□ 1.29
HDAC4-203ENST00000445704 DBNLQ9UJU6 430 aaKnown RBP23.11■■□□□ 1.29
HDAC4-203ENST00000445704 UQCRFS1P1P0C7P4 283 aa23.1■■□□□ 1.29
HDAC4-203ENST00000445704 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
HDAC4-203ENST00000445704 CCDC8Q9H0W5 538 aaPredicted RBP23.1■■□□□ 1.29
HDAC4-203ENST00000445704 ANGEL1Q9UNK9 670 aaKnown RBP23.1■■□□□ 1.29
HDAC4-203ENST00000445704 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
HDAC4-203ENST00000445704 TBC1D9Q6ZT07 1266 aa23.09■■□□□ 1.29
HDAC4-203ENST00000445704 ARMC9Q7Z3E5 817 aa23.09■■□□□ 1.29
HDAC4-203ENST00000445704 ERC1Q8IUD2 1116 aa23.09■■□□□ 1.29
HDAC4-203ENST00000445704 HMMRO75330 724 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 TNNI2P48788 182 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 SUPT20HL1Q3ZLR7 823 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 TTC39AQ5SRH9 613 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 LDLRAD1Q5T700 205 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 CDC42EP5Q6NZY7 148 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 DZIP1Q86YF9 867 aaKnown RBP23.08■■□□□ 1.29
HDAC4-203ENST00000445704 RHPN1Q8TCX5 695 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 ZNF384Q8TF68 577 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
HDAC4-203ENST00000445704 AKAP11Q9UKA4 1901 aa23.08■■□□□ 1.28
HDAC4-203ENST00000445704 MYH2Q9UKX2 1941 aa23.08■■□□□ 1.28
HDAC4-203ENST00000445704 GAKO14976 1311 aa23.08■■□□□ 1.28
HDAC4-203ENST00000445704 KIF23Q02241 960 aaPredicted RBP23.07■■□□□ 1.28
HDAC4-203ENST00000445704 MAP3K11Q16584 847 aa23.07■■□□□ 1.28
HDAC4-203ENST00000445704 CCDC158Q5M9N0 1113 aa23.07■■□□□ 1.28
HDAC4-203ENST00000445704 IL1RAPL2Q9NP60 686 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms