RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 TNFAIP1Q13829 316 aa23.34■■□□□ 1.33
ATPAF2-201ENST00000444058 GRIK5Q16478 980 aa23.34■■□□□ 1.33
ATPAF2-201ENST00000444058 ITPRIPQ8IWB1 547 aa23.34■■□□□ 1.33
ATPAF2-201ENST00000444058 CLRN2A0PK11 232 aa23.33■■□□□ 1.33
ATPAF2-201ENST00000444058 REM2Q8IYK8 340 aaPredicted RBP23.33■■□□□ 1.33
ATPAF2-201ENST00000444058 TEKT1Q969V4 418 aa23.33■■□□□ 1.33
ATPAF2-201ENST00000444058 HSPA8P11142 646 aaKnown RBP23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 ATP8B2P98198 1209 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 POLA2Q14181 598 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 SUPT20HL1Q3ZLR7 823 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 ARMC9Q7Z3E5 817 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 ZDHHC15Q96MV8 337 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 VEZTQ9HBM0 779 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 ZNF70Q9UC06 446 aaPredicted RBP23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 DENND2AQ9ULE3 1009 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 AOX1Q06278 1338 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 SALL1Q9NSC2 1324 aa23.32■■□□□ 1.32
ATPAF2-201ENST00000444058 TFCP2Q12800 502 aa23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 G3BP1Q13283 466 aaKnown RBP eCLIP23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 TTLL12Q14166 644 aaPredicted RBP23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 HHIPL2Q6UWX4 724 aa23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 SSH3Q8TE77 659 aa23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 ZIC5Q96T25 663 aa23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 PDS5AQ29RF7 1337 aaKnown RBP23.31■■□□□ 1.32
ATPAF2-201ENST00000444058 A0A1B0GUL7 405 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 UNCXA6NJT0 531 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 UBE2Q2LH0YL09 131 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 PHKA1P46020 1223 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 LBX1P52954 281 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 TIMM10P62072 90 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 RASA3Q14644 834 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 MAP3K11Q16584 847 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 LDLRAD1Q5T700 205 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 MOB2Q70IA6 237 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 RASAL3Q86YV0 1011 aa23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 TDRD3Q9H7E2 651 aaKnown RBP23.3■■□□□ 1.32
ATPAF2-201ENST00000444058 PPP1R12BO60237 982 aaPredicted RBP23.29■■□□□ 1.32
ATPAF2-201ENST00000444058 KIF23Q02241 960 aaPredicted RBP23.29■■□□□ 1.32
ATPAF2-201ENST00000444058 MVPQ14764 893 aaKnown RBP23.29■■□□□ 1.32
ATPAF2-201ENST00000444058 ADORA1P30542 326 aa23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 TNNI2P48788 182 aa23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 FKBP1CQ5VVH2 108 aa23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 TNS4Q8IZW8 715 aa23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 XAGE2Q96GT9 111 aa23.28■■□□□ 1.32
ATPAF2-201ENST00000444058 APOBEC3HQ6NTF7 200 aaKnown RBP23.27■■□□□ 1.32
ATPAF2-201ENST00000444058 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.32
ATPAF2-201ENST00000444058 ANGEL1Q9UNK9 670 aaKnown RBP23.27■■□□□ 1.32
ATPAF2-201ENST00000444058 PANK1Q8TE04 598 aa23.26■■□□□ 1.31
ATPAF2-201ENST00000444058 GPR108Q9NPR9 543 aa23.26■■□□□ 1.31
ATPAF2-201ENST00000444058 SAGE1Q9NXZ1 904 aa23.26■■□□□ 1.31
ATPAF2-201ENST00000444058 NOP58Q9Y2X3 529 aaKnown RBP23.26■■□□□ 1.31
ATPAF2-201ENST00000444058 SSC5DA1L4H1 1573 aa23.26■■□□□ 1.31
ATPAF2-201ENST00000444058 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 LDHBP07195 334 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 RASGRF1Q13972 1273 aa23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 NBPF12Q5TAG4 269 aaPredicted RBP23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 CSRNP1Q96S65 589 aa23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 TMOD2Q9NZR1 351 aa23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.25■■□□□ 1.31
ATPAF2-201ENST00000444058 PRDX5P30044 214 aa23.24■■□□□ 1.31
ATPAF2-201ENST00000444058 FAM83AQ86UY5 434 aa23.24■■□□□ 1.31
ATPAF2-201ENST00000444058 TEPSINQ96N21 525 aa23.24■■□□□ 1.31
ATPAF2-201ENST00000444058 NEUROD6Q96NK8 337 aa23.24■■□□□ 1.31
ATPAF2-201ENST00000444058 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
ATPAF2-201ENST00000444058 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
ATPAF2-201ENST00000444058 PRKG1Q13976 671 aa23.23■■□□□ 1.31
ATPAF2-201ENST00000444058 TCP10L2B9ZVM9 353 aa23.22■■□□□ 1.31
ATPAF2-201ENST00000444058 IREB2P48200 963 aaKnown RBP23.22■■□□□ 1.31
ATPAF2-201ENST00000444058 DDX19BQ9UMR2 479 aa23.22■■□□□ 1.31
ATPAF2-201ENST00000444058 DAGLAQ9Y4D2 1042 aa23.22■■□□□ 1.31
ATPAF2-201ENST00000444058 USP2O75604 605 aaPredicted RBP23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 GORABQ5T7V8 394 aa23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 SPTY2D1Q68D10 685 aaPredicted RBP23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 CEP85Q6P2H3 762 aa23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 CHMP4BQ9H444 224 aaKnown RBP23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 RNF186Q9NXI6 227 aa23.21■■□□□ 1.31
ATPAF2-201ENST00000444058 ARID4AP29374 1257 aaPredicted RBP23.2■■□□□ 1.3
ATPAF2-201ENST00000444058 OS9Q13438 667 aaPredicted RBP23.2■■□□□ 1.3
ATPAF2-201ENST00000444058 DIXDC1Q155Q3 683 aa23.2■■□□□ 1.3
ATPAF2-201ENST00000444058 SLC10A4Q96EP9 437 aa23.2■■□□□ 1.3
ATPAF2-201ENST00000444058 TMEM39BQ9GZU3 492 aa23.2■■□□□ 1.3
ATPAF2-201ENST00000444058 RPAP1Q9BWH6 1393 aaPredicted RBP23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 UQCRFS1P1P0C7P4 283 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 ZBTB48P10074 688 aaPredicted RBP23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 TM4SF4P48230 202 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 TNNI3KQ59H18 835 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 SPRYD7Q5W111 196 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 SLF2Q8IX21 1173 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 ANKRD13AQ8IZ07 590 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 HOOK2Q96ED9 719 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 FAM163AQ96GL9 167 aaPredicted RBP23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 FZD1Q9UP38 647 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 FPGT-TNNI3KV9GXZ4 949 aa23.19■■□□□ 1.3
ATPAF2-201ENST00000444058 GAKO14976 1311 aa23.18■■□□□ 1.3
ATPAF2-201ENST00000444058 CACNB3P54284 484 aa23.18■■□□□ 1.3
ATPAF2-201ENST00000444058 SPATA5Q8NB90 893 aa23.18■■□□□ 1.3
ATPAF2-201ENST00000444058 HMG20BQ9P0W2 317 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms