RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 MECOMQ03112 1051 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 DACT2Q5SW24 774 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 TMED8Q6PL24 325 aaPredicted RBP25.41■■□□□ 1.66
VPS13B-204ENST00000441350 USP17L1Q7RTZ2 530 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 CERS5Q8N5B7 392 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 NSUN4Q96CB9 384 aaKnown RBP25.41■■□□□ 1.66
VPS13B-204ENST00000441350 SEC62Q99442 399 aaKnown RBP25.41■■□□□ 1.66
VPS13B-204ENST00000441350 MCMDC2Q4G0Z9 681 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 OSBP2Q969R2 916 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 SUGT1Q9Y2Z0 365 aa25.41■■□□□ 1.66
VPS13B-204ENST00000441350 FBXW7Q969H0 707 aa25.4■■□□□ 1.66
VPS13B-204ENST00000441350 MAST3O60307 1309 aa25.39■■□□□ 1.66
VPS13B-204ENST00000441350 JDP2Q8WYK2 163 aa25.39■■□□□ 1.66
VPS13B-204ENST00000441350 REC8O95072 547 aa25.38■■□□□ 1.65
VPS13B-204ENST00000441350 MFAP1P55081 439 aaKnown RBP25.38■■□□□ 1.65
VPS13B-204ENST00000441350 NAA16Q6N069 864 aaPredicted RBP25.38■■□□□ 1.65
VPS13B-204ENST00000441350 ZNF589Q86UQ0 364 aaPredicted RBP25.38■■□□□ 1.65
VPS13B-204ENST00000441350 MXD3Q9BW11 206 aa25.38■■□□□ 1.65
VPS13B-204ENST00000441350 PUS7LQ9H0K6 701 aaKnown RBP25.38■■□□□ 1.65
VPS13B-204ENST00000441350 SBF1O95248 1867 aa25.38■■□□□ 1.65
VPS13B-204ENST00000441350 M0R2C6 588 aa25.37■■□□□ 1.65
VPS13B-204ENST00000441350 CYP7A1P22680 504 aa25.37■■□□□ 1.65
VPS13B-204ENST00000441350 DZIP1Q86YF9 867 aaKnown RBP25.37■■□□□ 1.65
VPS13B-204ENST00000441350 ADGRA1Q86SQ6 560 aa25.37■■□□□ 1.65
VPS13B-204ENST00000441350 DICER1Q9UPY3 1922 aaKnown RBP25.37■■□□□ 1.65
VPS13B-204ENST00000441350 LMNB1P20700 586 aa25.36■■□□□ 1.65
VPS13B-204ENST00000441350 CCDC129Q6ZRS4 1044 aa25.36■■□□□ 1.65
VPS13B-204ENST00000441350 CCDC171Q6TFL3 1326 aa25.35■■□□□ 1.65
VPS13B-204ENST00000441350 RAD17O75943 681 aa25.35■■□□□ 1.65
VPS13B-204ENST00000441350 VIL1P09327 827 aaKnown RBP25.35■■□□□ 1.65
VPS13B-204ENST00000441350 CXCL9Q07325 125 aa25.35■■□□□ 1.65
VPS13B-204ENST00000441350 GSTO1P78417 241 aa25.34■■□□□ 1.65
VPS13B-204ENST00000441350 USP26Q9BXU7 913 aa25.34■■□□□ 1.65
VPS13B-204ENST00000441350 LSG1Q9H089 658 aaKnown RBP25.34■■□□□ 1.65
VPS13B-204ENST00000441350 ANO2Q9NQ90 1003 aa25.34■■□□□ 1.65
VPS13B-204ENST00000441350 FZD9O00144 591 aa25.34■■□□□ 1.65
VPS13B-204ENST00000441350 PSMD14O00487 310 aa25.34■■□□□ 1.65
VPS13B-204ENST00000441350 MYH2Q9UKX2 1941 aa25.33■■□□□ 1.65
VPS13B-204ENST00000441350 GPAA1O43292 621 aa25.33■■□□□ 1.65
VPS13B-204ENST00000441350 EPB41L2O43491 1005 aaKnown RBP25.33■■□□□ 1.65
VPS13B-204ENST00000441350 DIXDC1Q155Q3 683 aa25.33■■□□□ 1.65
VPS13B-204ENST00000441350 GPR162Q16538 588 aa25.33■■□□□ 1.65
VPS13B-204ENST00000441350 RSBN1LQ6PCB5 846 aaPredicted RBP25.33■■□□□ 1.65
VPS13B-204ENST00000441350 KIAA1211Q6ZU35 1233 aa25.33■■□□□ 1.65
VPS13B-204ENST00000441350 FAM163AQ96GL9 167 aaPredicted RBP25.33■■□□□ 1.65
VPS13B-204ENST00000441350 MYO3BQ8WXR4 1341 aa25.32■■□□□ 1.64
VPS13B-204ENST00000441350 LDHCP07864 332 aa25.32■■□□□ 1.64
VPS13B-204ENST00000441350 GMLQ99445 158 aa25.32■■□□□ 1.64
VPS13B-204ENST00000441350 UPF2Q9HAU5 1272 aaKnown RBP25.32■■□□□ 1.64
VPS13B-204ENST00000441350 TTF2Q9UNY4 1162 aaKnown RBP25.32■■□□□ 1.64
VPS13B-204ENST00000441350 PTH1RQ03431 593 aa25.31■■□□□ 1.64
VPS13B-204ENST00000441350 CIAPIN1Q6FI81 312 aa25.31■■□□□ 1.64
VPS13B-204ENST00000441350 SLF2Q8IX21 1173 aa25.31■■□□□ 1.64
VPS13B-204ENST00000441350 AIDAQ96BJ3 306 aa25.31■■□□□ 1.64
VPS13B-204ENST00000441350 STRBPQ96SI9 672 aaKnown RBP25.31■■□□□ 1.64
VPS13B-204ENST00000441350 RIOK1Q9BRS2 568 aaKnown RBP25.31■■□□□ 1.64
VPS13B-204ENST00000441350 MBD4O95243 580 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 MIGA1Q8NAN2 632 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 MROH7-TTC4A0A0A0MT08 1334 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 GAKO14976 1311 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 MAGEB6P1A0A0J9YX57 407 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 F8W031 263 aaPredicted RBP25.3■■□□□ 1.64
VPS13B-204ENST00000441350 TNIP1Q15025 636 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 KIAA0825Q8IV33 1275 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 MRIQ9BWK5 157 aa25.3■■□□□ 1.64
VPS13B-204ENST00000441350 GRIN3BO60391 1043 aa25.29■■□□□ 1.64
VPS13B-204ENST00000441350 HDLBPQ00341 1268 aaKnown RBP25.29■■□□□ 1.64
VPS13B-204ENST00000441350 VPS53Q5VIR6 699 aa25.29■■□□□ 1.64
VPS13B-204ENST00000441350 LCORLQ8N3X6 602 aa25.29■■□□□ 1.64
VPS13B-204ENST00000441350 MAP4K1Q92918 833 aa25.29■■□□□ 1.64
VPS13B-204ENST00000441350 ARMT1Q9H993 441 aa25.29■■□□□ 1.64
VPS13B-204ENST00000441350 FOXP2O15409 715 aa25.28■■□□□ 1.64
VPS13B-204ENST00000441350 EIF6P56537 245 aaKnown RBP25.28■■□□□ 1.64
VPS13B-204ENST00000441350 PPP4CP60510 307 aa25.28■■□□□ 1.64
VPS13B-204ENST00000441350 AGBL3Q8NEM8 1001 aa25.28■■□□□ 1.64
VPS13B-204ENST00000441350 TSHZ2Q9NRE2 1034 aa25.28■■□□□ 1.64
VPS13B-204ENST00000441350 GPR75-ASB3A0A0A6YYF3 556 aa25.27■■□□□ 1.64
VPS13B-204ENST00000441350 HSPD1P10809 573 aaKnown RBP25.27■■□□□ 1.64
VPS13B-204ENST00000441350 HHIPL2Q6UWX4 724 aa25.27■■□□□ 1.64
VPS13B-204ENST00000441350 DSCC1Q9BVC3 393 aa25.27■■□□□ 1.64
VPS13B-204ENST00000441350 C22orf23Q9BZE7 217 aa25.27■■□□□ 1.64
VPS13B-204ENST00000441350 SCNN1DP51172 638 aa25.26■■□□□ 1.63
VPS13B-204ENST00000441350 DYNLL1P63167 89 aaKnown RBP25.26■■□□□ 1.63
VPS13B-204ENST00000441350 TBC1D32Q96NH3 1257 aa25.26■■□□□ 1.63
VPS13B-204ENST00000441350 AATFQ9NY61 560 aaKnown RBP eCLIP25.26■■□□□ 1.63
VPS13B-204ENST00000441350 ZBTB12Q9Y330 459 aaPredicted RBP25.26■■□□□ 1.63
VPS13B-204ENST00000441350 DAGLAQ9Y4D2 1042 aa25.26■■□□□ 1.63
VPS13B-204ENST00000441350 TEKT1Q969V4 418 aa25.26■■□□□ 1.63
VPS13B-204ENST00000441350 BAG3O95817 575 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 GNAT2P19087 354 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 CRKP46108 304 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 RBM25P49756 843 aaKnown RBP25.25■■□□□ 1.63
VPS13B-204ENST00000441350 RNF181Q9P0P0 153 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 SERPINA10Q9UK55 444 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 ZNF541Q9H0D2 1346 aa25.25■■□□□ 1.63
VPS13B-204ENST00000441350 ADAMTSL1Q8N6G6 1762 aa25.24■■□□□ 1.63
VPS13B-204ENST00000441350 C9orf131Q5VYM1 1079 aa25.24■■□□□ 1.63
VPS13B-204ENST00000441350 CERS3Q8IU89 383 aa25.24■■□□□ 1.63
VPS13B-204ENST00000441350 UTRNP46939 3433 aa25.24■■□□□ 1.63
VPS13B-204ENST00000441350 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms