RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 APLP1P51693 650 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 TTC39AQ5SRH9 613 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 KRT26Q7Z3Y9 468 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 SPATA5Q8NB90 893 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 DCPSQ96C86 337 aaKnown RBP12.86□□□□□ -0.35
UBE2F-213ENST00000439780 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
UBE2F-213ENST00000439780 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
UBE2F-213ENST00000439780 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBE2F-213ENST00000439780 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 CST9Q5W186 159 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
UBE2F-213ENST00000439780 ZNF384Q8TF68 577 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-213ENST00000439780 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
UBE2F-213ENST00000439780 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
UBE2F-213ENST00000439780 ZAP70P43403 619 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 HDLBPQ00341 1268 aaKnown RBP12.84□□□□□ -0.35
UBE2F-213ENST00000439780 AAMPQ13685 434 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
UBE2F-213ENST00000439780 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
UBE2F-213ENST00000439780 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 IGHDP01880 384 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
UBE2F-213ENST00000439780 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
UBE2F-213ENST00000439780 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
UBE2F-213ENST00000439780 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
UBE2F-213ENST00000439780 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 ZDHHC15Q96MV8 337 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
UBE2F-213ENST00000439780 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
UBE2F-213ENST00000439780 TMEM88BA6NKF7 163 aa12.82□□□□□ -0.36
UBE2F-213ENST00000439780 MECOMQ03112 1051 aa12.82□□□□□ -0.36
UBE2F-213ENST00000439780 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
UBE2F-213ENST00000439780 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
UBE2F-213ENST00000439780 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
UBE2F-213ENST00000439780 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
UBE2F-213ENST00000439780 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
UBE2F-213ENST00000439780 CACNB3P54284 484 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 SPTY2D1Q68D10 685 aaPredicted RBP12.81□□□□□ -0.36
UBE2F-213ENST00000439780 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 DNAJC5GQ8N7S2 189 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 VEZTQ9HBM0 779 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 CREBZFQ9NS37 354 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 MAST3O60307 1309 aa12.81□□□□□ -0.36
UBE2F-213ENST00000439780 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
UBE2F-213ENST00000439780 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
UBE2F-213ENST00000439780 NSUN4Q96CB9 384 aaKnown RBP12.8□□□□□ -0.36
UBE2F-213ENST00000439780 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
UBE2F-213ENST00000439780 GAKO14976 1311 aa12.8□□□□□ -0.36
UBE2F-213ENST00000439780 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
UBE2F-213ENST00000439780 ECM29Q5VYK3 1845 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 MYO1BO43795 1136 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 ATP5JP18859 108 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
UBE2F-213ENST00000439780 RAI14Q9P0K7 980 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
UBE2F-213ENST00000439780 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 RASA3Q14644 834 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 CDAN1Q8IWY9 1227 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 BOLA2Q9H3K6 86 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
UBE2F-213ENST00000439780 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 NFIAQ12857 509 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 NBPF12Q5TAG4 269 aaPredicted RBP12.77□□□□□ -0.37
UBE2F-213ENST00000439780 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 TEPSINQ96N21 525 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
UBE2F-213ENST00000439780 HAUS7Q99871 368 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 TMEM39BQ9GZU3 492 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
UBE2F-213ENST00000439780 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
UBE2F-213ENST00000439780 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms