RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
APP-208ENST00000439274 RALYLQ86SE5 291 aaKnown RBP17.88■□□□□ 0.45
APP-208ENST00000439274 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
APP-208ENST00000439274 APPBP2Q92624 585 aa17.88■□□□□ 0.45
APP-208ENST00000439274 POLR3EQ9NVU0 708 aa17.88■□□□□ 0.45
APP-208ENST00000439274 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
APP-208ENST00000439274 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
APP-208ENST00000439274 PARP4Q9UKK3 1724 aaKnown RBP17.88■□□□□ 0.45
APP-208ENST00000439274 SMC2O95347 1197 aa17.88■□□□□ 0.45
APP-208ENST00000439274 RXRAP19793 462 aa17.88■□□□□ 0.45
APP-208ENST00000439274 CCAR2Q8N163 923 aaKnown RBP17.88■□□□□ 0.45
APP-208ENST00000439274 XPO4Q9C0E2 1151 aaKnown RBP17.88■□□□□ 0.45
APP-208ENST00000439274 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
APP-208ENST00000439274 MROH7-TTC4A0A0A0MT08 1334 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ZNF213O14771 459 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ZNF202O95125 648 aa17.87■□□□□ 0.45
APP-208ENST00000439274 YEATS4O95619 227 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ZFYP08048 801 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 MARCKSP29966 332 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 DMTNQ08495 405 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
APP-208ENST00000439274 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
APP-208ENST00000439274 NBPF3Q9H094 633 aa17.87■□□□□ 0.45
APP-208ENST00000439274 IFNKQ9P0W0 207 aa17.87■□□□□ 0.45
APP-208ENST00000439274 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 COL5A2P05997 1499 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 DHX16O60231 1041 aaKnown RBP17.87■□□□□ 0.45
APP-208ENST00000439274 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
APP-208ENST00000439274 LRRFIP1Q32MZ4 808 aaKnown RBP17.87■□□□□ 0.45
APP-208ENST00000439274 SYNE3Q6ZMZ3 975 aa17.87■□□□□ 0.45
APP-208ENST00000439274 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
APP-208ENST00000439274 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
APP-208ENST00000439274 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
APP-208ENST00000439274 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
APP-208ENST00000439274 PFKFB1P16118 471 aa17.86■□□□□ 0.45
APP-208ENST00000439274 SYCP1Q15431 976 aa17.86■□□□□ 0.45
APP-208ENST00000439274 AXDND1Q5T1B0 1012 aaPredicted RBP17.86■□□□□ 0.45
APP-208ENST00000439274 ANO1Q5XXA6 986 aa17.86■□□□□ 0.45
APP-208ENST00000439274 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
APP-208ENST00000439274 PLEKHG2Q9H7P9 1386 aa17.86■□□□□ 0.45
APP-208ENST00000439274 TMC6Q7Z403 805 aa17.86■□□□□ 0.45
APP-208ENST00000439274 BRAPQ7Z569 592 aa17.86■□□□□ 0.45
APP-208ENST00000439274 MCAMP43121 646 aa17.85■□□□□ 0.45
APP-208ENST00000439274 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
APP-208ENST00000439274 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
APP-208ENST00000439274 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
APP-208ENST00000439274 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
APP-208ENST00000439274 ARMCX5Q6P1M9 558 aa17.84■□□□□ 0.45
APP-208ENST00000439274 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
APP-208ENST00000439274 TBC1D10CQ8IV04 446 aa17.84■□□□□ 0.45
APP-208ENST00000439274 OSBPL5Q9H0X9 879 aaPredicted RBP17.84■□□□□ 0.45
APP-208ENST00000439274 WDR17Q8IZU2 1322 aa17.84■□□□□ 0.45
APP-208ENST00000439274 GSDMDP57764 484 aa17.83■□□□□ 0.45
APP-208ENST00000439274 NLRP12P59046 1061 aa17.83■□□□□ 0.45
APP-208ENST00000439274 NCAPHQ15003 741 aa17.83■□□□□ 0.45
APP-208ENST00000439274 METTL24Q5JXM2 366 aa17.83■□□□□ 0.45
APP-208ENST00000439274 RIC1Q4ADV7 1423 aa17.83■□□□□ 0.45
APP-208ENST00000439274 PHKBQ93100 1093 aa17.83■□□□□ 0.44
APP-208ENST00000439274 BPIFA3Q9BQP9 254 aa17.83■□□□□ 0.44
APP-208ENST00000439274 ALG1Q9BT22 464 aa17.83■□□□□ 0.44
APP-208ENST00000439274 GPTP24298 496 aa17.82■□□□□ 0.44
APP-208ENST00000439274 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
APP-208ENST00000439274 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
APP-208ENST00000439274 E4F1Q66K89 784 aaPredicted RBP17.82■□□□□ 0.44
APP-208ENST00000439274 COL22A1Q8NFW1 1626 aaPredicted RBP17.82■□□□□ 0.44
APP-208ENST00000439274 IGSF3O75054 1194 aa17.82■□□□□ 0.44
APP-208ENST00000439274 APPP05067 770 aa17.82■□□□□ 0.44
APP-208ENST00000439274 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
APP-208ENST00000439274 CMA1P23946 247 aa17.82■□□□□ 0.44
APP-208ENST00000439274 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
APP-208ENST00000439274 CGNQ9P2M7 1197 aaKnown RBP17.82■□□□□ 0.44
APP-208ENST00000439274 UBE2Q2LH0YL09 131 aa17.81■□□□□ 0.44
APP-208ENST00000439274 CSF1RP07333 972 aa17.81■□□□□ 0.44
APP-208ENST00000439274 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
APP-208ENST00000439274 CDC27P30260 824 aa17.81■□□□□ 0.44
APP-208ENST00000439274 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
APP-208ENST00000439274 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
APP-208ENST00000439274 DNAJC10Q8IXB1 793 aa17.81■□□□□ 0.44
APP-208ENST00000439274 GREM2Q9H772 168 aa17.81■□□□□ 0.44
APP-208ENST00000439274 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
APP-208ENST00000439274 IMPACTQ9P2X3 320 aa17.81■□□□□ 0.44
APP-208ENST00000439274 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
APP-208ENST00000439274 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
APP-208ENST00000439274 C4BP0C0L5 1744 aa17.81■□□□□ 0.44
APP-208ENST00000439274 COL16A1Q07092 1604 aaPredicted RBP17.81■□□□□ 0.44
APP-208ENST00000439274 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
APP-208ENST00000439274 IDH1O75874 414 aaKnown RBP17.81■□□□□ 0.44
APP-208ENST00000439274 ADD2P35612 726 aa17.81■□□□□ 0.44
APP-208ENST00000439274 TRDNQ13061 729 aa17.81■□□□□ 0.44
APP-208ENST00000439274 SLC39A14Q15043 492 aa17.81■□□□□ 0.44
APP-208ENST00000439274 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
APP-208ENST00000439274 UTP14CQ5TAP6 766 aaKnown RBP17.81■□□□□ 0.44
APP-208ENST00000439274 LDHAL6AQ6ZMR3 332 aa17.81■□□□□ 0.44
APP-208ENST00000439274 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
APP-208ENST00000439274 FEZ1Q99689 392 aa17.81■□□□□ 0.44
APP-208ENST00000439274 RIPOR2Q9Y4F9 1068 aa17.81■□□□□ 0.44
APP-208ENST00000439274 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
APP-208ENST00000439274 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms