RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 GSTO1P78417 241 aa22.29■■□□□ 1.16
HDAC6-208ENST00000438518 DZIP1Q86YF9 867 aaKnown RBP22.29■■□□□ 1.16
HDAC6-208ENST00000438518 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
HDAC6-208ENST00000438518 NDUFB9Q9Y6M9 179 aa22.29■■□□□ 1.16
HDAC6-208ENST00000438518 IDH1O75874 414 aaKnown RBP22.28■■□□□ 1.16
HDAC6-208ENST00000438518 ZFYP08048 801 aaPredicted RBP22.28■■□□□ 1.16
HDAC6-208ENST00000438518 USP17L8P0C7I0 530 aa22.28■■□□□ 1.16
HDAC6-208ENST00000438518 GSPT1P15170 499 aaKnown RBP22.28■■□□□ 1.16
HDAC6-208ENST00000438518 TBC1D9Q6ZT07 1266 aa22.28■■□□□ 1.16
HDAC6-208ENST00000438518 PIH1D3Q9NQM4 214 aaKnown RBP22.28■■□□□ 1.16
HDAC6-208ENST00000438518 RAI14Q9P0K7 980 aa22.28■■□□□ 1.16
HDAC6-208ENST00000438518 TTF2Q9UNY4 1162 aaKnown RBP22.28■■□□□ 1.16
HDAC6-208ENST00000438518 DDNO94850 711 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-208ENST00000438518 LDHCP07864 332 aa22.27■■□□□ 1.16
HDAC6-208ENST00000438518 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-208ENST00000438518 GMPSP49915 693 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-208ENST00000438518 KIAA0825Q8IV33 1275 aa22.27■■□□□ 1.16
HDAC6-208ENST00000438518 NSUN4Q96CB9 384 aaKnown RBP22.27■■□□□ 1.16
HDAC6-208ENST00000438518 FSD1Q9BTV5 496 aa22.27■■□□□ 1.16
HDAC6-208ENST00000438518 SERPINA10Q9UK55 444 aa22.27■■□□□ 1.16
HDAC6-208ENST00000438518 ZBTB12Q9Y330 459 aaPredicted RBP22.27■■□□□ 1.16
HDAC6-208ENST00000438518 MYH2Q9UKX2 1941 aa22.27■■□□□ 1.16
HDAC6-208ENST00000438518 IQCA1LA6NCM1 817 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 HIP1O00291 1037 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 ZNF280AP59817 542 aaPredicted RBP22.26■■□□□ 1.15
HDAC6-208ENST00000438518 HHIPL2Q6UWX4 724 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 EDC3Q96F86 508 aaKnown RBP22.26■■□□□ 1.15
HDAC6-208ENST00000438518 MXD3Q9BW11 206 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 GPRC5DQ9NZD1 345 aa22.26■■□□□ 1.15
HDAC6-208ENST00000438518 ECM29Q5VYK3 1845 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 MAP4K4O95819 1239 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-208ENST00000438518 SDSP20132 328 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 SCNN1DP51172 638 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 MECOMQ03112 1051 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 NAA16Q6N069 864 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-208ENST00000438518 SKAP1Q86WV1 359 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 CERS3Q8IU89 383 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
HDAC6-208ENST00000438518 FAM163AQ96GL9 167 aaPredicted RBP22.25■■□□□ 1.15
HDAC6-208ENST00000438518 H7C1D1 291 aa22.24■■□□□ 1.15
HDAC6-208ENST00000438518 UBE3CQ15386 1083 aa22.24■■□□□ 1.15
HDAC6-208ENST00000438518 SLC9C2Q5TAH2 1124 aa22.24■■□□□ 1.15
HDAC6-208ENST00000438518 MTMR14Q8NCE2 650 aa22.24■■□□□ 1.15
HDAC6-208ENST00000438518 CNOT7Q9UIV1 285 aaKnown RBP22.24■■□□□ 1.15
HDAC6-208ENST00000438518 GAKO14976 1311 aa22.24■■□□□ 1.15
HDAC6-208ENST00000438518 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
HDAC6-208ENST00000438518 ADD2P35612 726 aa22.23■■□□□ 1.15
HDAC6-208ENST00000438518 MICALL2Q8IY33 904 aa22.23■■□□□ 1.15
HDAC6-208ENST00000438518 MROH7-TTC4A0A0A0MT08 1334 aa22.23■■□□□ 1.15
HDAC6-208ENST00000438518 PDE6AP16499 860 aa22.22■■□□□ 1.15
HDAC6-208ENST00000438518 CRKP46108 304 aa22.22■■□□□ 1.15
HDAC6-208ENST00000438518 GRIK5Q16478 980 aa22.22■■□□□ 1.15
HDAC6-208ENST00000438518 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
HDAC6-208ENST00000438518 ZDHHC15Q96MV8 337 aa22.22■■□□□ 1.15
HDAC6-208ENST00000438518 RNF113AO15541 343 aaKnown RBP22.21■■□□□ 1.15
HDAC6-208ENST00000438518 NOL10Q9BSC4 688 aaKnown RBP22.21■■□□□ 1.15
HDAC6-208ENST00000438518 MYOZ2Q9NPC6 264 aa22.21■■□□□ 1.15
HDAC6-208ENST00000438518 ADARB2Q9NS39 739 aaKnown RBP22.21■■□□□ 1.15
HDAC6-208ENST00000438518 HACL1Q9UJ83 578 aa22.21■■□□□ 1.15
HDAC6-208ENST00000438518 BAG3O95817 575 aa22.2■■□□□ 1.14
HDAC6-208ENST00000438518 CYP7A1P22680 504 aa22.2■■□□□ 1.14
HDAC6-208ENST00000438518 APPBP2Q92624 585 aa22.2■■□□□ 1.14
HDAC6-208ENST00000438518 ZNF532Q9HCE3 1301 aa22.2■■□□□ 1.14
HDAC6-208ENST00000438518 ADAMTSL1Q8N6G6 1762 aa22.2■■□□□ 1.14
HDAC6-208ENST00000438518 TCRBV5S4A2TA0A5A2 114 aa22.19■■□□□ 1.14
HDAC6-208ENST00000438518 DLGAP5Q15398 846 aa22.19■■□□□ 1.14
HDAC6-208ENST00000438518 ZNF384Q8TF68 577 aa22.19■■□□□ 1.14
HDAC6-208ENST00000438518 GPR75-ASB3A0A0A6YYF3 556 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 MYO1BO43795 1136 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 PLCG2P16885 1265 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 RBM5P52756 815 aaKnown RBP eCLIP22.18■■□□□ 1.14
HDAC6-208ENST00000438518 DIXDC1Q155Q3 683 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 CFAP100Q494V2 611 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 USP50Q70EL3 339 aaPredicted RBP22.18■■□□□ 1.14
HDAC6-208ENST00000438518 DIAPH3Q9NSV4 1193 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 DAGLAQ9Y4D2 1042 aa22.18■■□□□ 1.14
HDAC6-208ENST00000438518 SPDYE2BA6NHP3 402 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 SPDYE6P0CI01 402 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 VEGFAP15692 232 aaPredicted RBP22.17■■□□□ 1.14
HDAC6-208ENST00000438518 PPP4CP60510 307 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 KIF4BQ2VIQ3 1234 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 ZMYM1Q5SVZ6 1142 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 PNMA8AQ86V59 439 aaPredicted RBP22.17■■□□□ 1.14
HDAC6-208ENST00000438518 RUFY2Q8WXA3 655 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 ZBED3Q96IU2 234 aaPredicted RBP22.17■■□□□ 1.14
HDAC6-208ENST00000438518 HELLSQ9NRZ9 838 aa22.17■■□□□ 1.14
HDAC6-208ENST00000438518 RAD50Q92878 1312 aa22.16■■□□□ 1.14
HDAC6-208ENST00000438518 EPHX2P34913 555 aa22.16■■□□□ 1.14
HDAC6-208ENST00000438518 FOCADQ5VW36 1801 aa22.15■■□□□ 1.14
HDAC6-208ENST00000438518 CDC45O75419 566 aa22.15■■□□□ 1.14
HDAC6-208ENST00000438518 EPS15P42566 896 aa22.15■■□□□ 1.14
HDAC6-208ENST00000438518 BTDP43251 543 aa22.15■■□□□ 1.14
HDAC6-208ENST00000438518 MFAP1P55081 439 aaKnown RBP22.15■■□□□ 1.14
HDAC6-208ENST00000438518 MAGEB6P1A0A0J9YX57 407 aa22.14■■□□□ 1.13
HDAC6-208ENST00000438518 WNT10BO00744 389 aa22.14■■□□□ 1.13
HDAC6-208ENST00000438518 APOBEC3HQ6NTF7 200 aaKnown RBP22.14■■□□□ 1.13
HDAC6-208ENST00000438518 AIDAQ96BJ3 306 aa22.14■■□□□ 1.13
HDAC6-208ENST00000438518 TAF1DQ9H5J8 278 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms