RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 CTSWP56202 376 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 TOB2Q14106 344 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 ATP2B3Q16720 1220 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 SCN4AP35499 1836 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 SLX4Q8IY92 1834 aa13.06□□□□□ -0.32
ERGIC3-207ENST00000438317 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 LARGE1O95461 756 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 CYP21A2P08686 494 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 UQCRFS1P1P0C7P4 283 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 ITGA6P23229 1130 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 CCDC173Q0VFZ6 552 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 PARP10Q53GL7 1025 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 METTL24Q5JXM2 366 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 DHX32Q7L7V1 743 aaKnown RBP13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 CNNM1Q9NRU3 951 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 MTMR6Q9Y217 621 aa13.05□□□□□ -0.32
ERGIC3-207ENST00000438317 AKAP11Q9UKA4 1901 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 HSPD1P10809 573 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 GPTP24298 496 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 RGS19P49795 217 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 UBE2HP62256 183 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 PPP1R9BQ96SB3 815 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 LARP6Q9BRS8 491 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■□□ 17.4
ERGIC3-207ENST00000438317 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
ERGIC3-207ENST00000438317 RGL2O15211 777 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 SRGNP10124 158 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 FGD1P98174 961 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 EXOSC10Q01780 885 aaKnown RBP13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 CCDC129Q6ZRS4 1044 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 Q6ZUG5 572 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 NDUFB9Q9Y6M9 179 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 MROH5Q6ZUA9 1318 aa13.03□□□□□ -0.32
ERGIC3-207ENST00000438317 PDE8BO95263 885 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 STYK1Q6J9G0 422 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 APPBP2Q92624 585 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 GTF3C6Q969F1 213 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 TRIM44Q96DX7 344 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 UTP14AQ9BVJ6 771 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 GREM2Q9H772 168 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 TBC1D2BQ9UPU7 963 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
ERGIC3-207ENST00000438317 PFKFB2O60825 505 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 ADORA1P30542 326 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 KRT85P78386 507 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 LPIN2Q92539 896 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 RBM27Q9P2N5 1060 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 MAST3O60307 1309 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
ERGIC3-207ENST00000438317 SCN7AQ01118 1682 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 RTL9Q8NET4 1388 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 E7EWF7 191 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 EPHX2P34913 555 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 ZAP70P43403 619 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 MLLT1Q03111 559 aaPredicted RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 UBE3CQ15386 1083 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 UVSSAQ2YD98 709 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 HS1BP3Q53T59 392 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 SOGA3Q5TF21 947 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 VGLL2Q8N8G2 317 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 OSBP2Q969R2 916 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 MASTLQ96GX5 879 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 SCAND2PQ9GZW5 306 aaPredicted RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 TSPY26PQ9H489 355 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
ERGIC3-207ENST00000438317 HACL1Q9UJ83 578 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
ERGIC3-207ENST00000438317 ELP1O95163 1332 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
ERGIC3-207ENST00000438317 SYCE3A1L190 88 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms