RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 CPLX1O14810 134 aa17.3■□□□□ 0.36
TMCO3-202ENST00000434316 FGAP02671 866 aa17.3■□□□□ 0.36
TMCO3-202ENST00000434316 NBPF14Q5TI25 921 aa17.3■□□□□ 0.36
TMCO3-202ENST00000434316 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
TMCO3-202ENST00000434316 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
TMCO3-202ENST00000434316 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
TMCO3-202ENST00000434316 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
TMCO3-202ENST00000434316 ADORA1P30542 326 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 DENND2AQ9ULE3 1009 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 FHOD1Q9Y613 1164 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 CMA1P23946 247 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 BRAPQ7Z569 592 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 A0A0U1RQG5 324 aaPredicted RBP17.29■□□□□ 0.36
TMCO3-202ENST00000434316 ETF1P62495 437 aaKnown RBP17.29■□□□□ 0.36
TMCO3-202ENST00000434316 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
TMCO3-202ENST00000434316 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
TMCO3-202ENST00000434316 KCNJ6P48051 423 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
TMCO3-202ENST00000434316 TMEM232C9JQI7 657 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 UBASH3AP57075 661 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 PNOCQ13519 176 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 SCARF1Q14162 830 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
TMCO3-202ENST00000434316 TRIM65Q6PJ69 517 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 CHMP4CQ96CF2 233 aa17.28■□□□□ 0.36
TMCO3-202ENST00000434316 NRDCO43847 1150 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 RXRAP19793 462 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 SYKP43405 635 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 ANKLE2Q86XL3 938 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 PUS7LQ9H0K6 701 aaKnown RBP17.27■□□□□ 0.36
TMCO3-202ENST00000434316 SERPINC1P01008 464 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 PI16Q6UXB8 463 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
TMCO3-202ENST00000434316 IKBKBO14920 756 aa17.27■□□□□ 0.35
TMCO3-202ENST00000434316 DHX16O60231 1041 aaKnown RBP17.27■□□□□ 0.35
TMCO3-202ENST00000434316 SHC4Q6S5L8 630 aa17.27■□□□□ 0.35
TMCO3-202ENST00000434316 DCAF5Q96JK2 942 aa17.27■□□□□ 0.35
TMCO3-202ENST00000434316 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.35
TMCO3-202ENST00000434316 PNMA6AP0CW24 399 aaPredicted RBP17.26■□□□□ 0.35
TMCO3-202ENST00000434316 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 CABP4P57796 275 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 SLC39A14Q15043 492 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 CLIC6Q96NY7 704 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
TMCO3-202ENST00000434316 HSP90AA4PQ58FG1 418 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 TTC39AQ5SRH9 613 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
TMCO3-202ENST00000434316 TUBE1Q9UJT0 475 aa17.26■□□□□ 0.35
TMCO3-202ENST00000434316 URI1O94763 535 aaPredicted RBP17.25■□□□□ 0.35
TMCO3-202ENST00000434316 PLA2G4AP47712 749 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 TAF3Q5VWG9 929 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 RALYLQ86SE5 291 aaKnown RBP17.25■□□□□ 0.35
TMCO3-202ENST00000434316 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 NCOA7Q8NI08 942 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 EPC1Q9H2F5 836 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 ZAP70P43403 619 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 PHLPP2Q6ZVD8 1323 aa17.25■□□□□ 0.35
TMCO3-202ENST00000434316 A1BGP04217 495 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 MYL5Q02045 173 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 VPS37DQ86XT2 251 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 UBXN4Q92575 508 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
TMCO3-202ENST00000434316 ALG1Q9BT22 464 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 CARD6Q9BX69 1037 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 CEP126Q9P2H0 1117 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 ZBTB22O15209 634 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 FANCLQ9NW38 375 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 HPSEQ9Y251 543 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 SEC31AO94979 1220 aaKnown RBP17.24■□□□□ 0.35
TMCO3-202ENST00000434316 PHKBQ93100 1093 aa17.24■□□□□ 0.35
TMCO3-202ENST00000434316 ZNF213O14771 459 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 PTPAQ15257 358 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 CHRNA2Q15822 529 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
TMCO3-202ENST00000434316 MNS1Q8NEH6 495 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 NBPF3Q9H094 633 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 INTS13Q9NVM9 706 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
TMCO3-202ENST00000434316 GPAA1O43292 621 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 TADA3O75528 432 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 KRT40Q6A162 431 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 METTL16Q86W50 562 aaKnown RBP17.23■□□□□ 0.35
TMCO3-202ENST00000434316 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
TMCO3-202ENST00000434316 TIGD1Q96MW7 591 aa17.23■□□□□ 0.35
TMCO3-202ENST00000434316 UBE2Q2LH0YL09 131 aa17.22■□□□□ 0.35
TMCO3-202ENST00000434316 FOXN1O15353 648 aa17.22■□□□□ 0.35
TMCO3-202ENST00000434316 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■■ 31
TMCO3-202ENST00000434316 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
TMCO3-202ENST00000434316 CDC27P30260 824 aa17.22■□□□□ 0.35
TMCO3-202ENST00000434316 PDE4BQ07343 736 aa17.22■□□□□ 0.35
TMCO3-202ENST00000434316 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
TMCO3-202ENST00000434316 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms